E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036141
BDB036141
US20250074910, Example 44-1
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(CC3CCC4(CC3)CC(=O)C3(CC3)C4)CC2)C1)C(C)C
C36H49FN6O3
632.825000
YYJKPDXBUXAQHB-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725747; PubChem:CID176456306
Local ready
Direct docking supported
E3L036142
BDB036142
BDBM725748
CCN(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC[C@@]4(CC3)CC(=O)C3(CCOCC3)C4)CC2)C1)C(C)C
C37H51FN6O4
662.851000
YUXARJXPJIOTBL-VZKVIHFSSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM725748
Local ready
Direct docking supported
E3L036143
BDB036143
US20250074910, Example 46-1
CCN(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(CC3CCC4(CC3)CC(=O)N(C)C4)CC2)C1)C(C)C
C33H46FN7O3
607.775000
YTYBBAYWZDOICM-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725749; PubChem:CID176456308
Local ready
Direct docking supported
E3L036144
BDB036144
US20250074910, Example 47-1
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(CC3CCC4(CC3)CC(=O)N(C)C4)CC2)C1)C(C)C
C34H48FN7O3
621.802000
MAJPYCXXBJRPIF-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725750; PubChem:CID176456309
Local ready
Direct docking supported
E3L036145
BDB036145
US20250074910, Example 49
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(CC3CCC4(CC3)COC(=O)C4)CC2)C1)C(C)C
C33H45FN6O4
608.759000
QZHSDAFIWYTUQZ-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725751; PubChem:CID176456310
Local ready
Direct docking supported
E3L036146
BDB036146
US20250074910, Example 50-1
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C35H46FN5O4
619.782000
IWUREPCUNGHKLY-CIDHCYHYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725752; PubChem:CID176456311
Local ready
Direct docking supported
E3L036147
BDB036147
US20250074910, Example 50-2
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C35H46FN5O4
619.782000
IWUREPCUNGHKLY-DVAOISOESA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725753; PubChem:CID176456312
Local ready
Direct docking supported
E3L036148
BDB036148
US20250074910, Example 50-1b
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC4CC[C@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H46FN5O4
619.782000
IWUREPCUNGHKLY-YOIVSZLLSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725754; PubChem:CID176456313
Local ready
Direct docking supported
E3L036149
BDB036149
US20250074910, Example 50-2a
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CC[C@@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H46FN5O4
619.782000
IWUREPCUNGHKLY-WIPDQZLISA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725755; PubChem:CID176456314
Local ready
Direct docking supported
E3L036150
BDB036150
US20250074910, Example 50-2b
CCN(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CC[C@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H46FN5O4
619.782000
IWUREPCUNGHKLY-RQLAYIIUSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725756; PubChem:CID176456315
Local ready
Direct docking supported
E3L036151
BDB036151
US20250074910, Example 51-1
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C36H48FN5O4
633.809000
MJFQRLKSQHIKPL-TZNMGBFISA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725757; PubChem:CID176456316
Local ready
Direct docking supported
E3L036152
BDB036152
US20250074910, Example 51-2
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C36H48FN5O4
633.809000
MJFQRLKSQHIKPL-AIXKKLOWSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725758; PubChem:CID176456317
Local ready
Direct docking supported
E3L036153
BDB036153
US20250074910, Example 51-1b
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@@H]3CC4CC[C@@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C36H48FN5O4
633.809000
MJFQRLKSQHIKPL-WCSHWDNSSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725759; PubChem:CID176456318
Local ready
Direct docking supported
E3L036154
BDB036154
US20250074910, Example 51-2a
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CC[C@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C36H48FN5O4
633.809000
MJFQRLKSQHIKPL-MJHVGBGVSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725760; PubChem:CID176456319
Local ready
Direct docking supported
E3L036155
BDB036155
US20250074910, Example 51-2b
CC(C)N(C(=O)c1cc(F)ccc1Oc1cncnc1N1CC2(CCN(C[C@H]3CC4CC[C@@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C36H48FN5O4
633.809000
MJFQRLKSQHIKPL-DCAGMPROSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725761; PubChem:CID176456320
Local ready
Direct docking supported
E3L036156
BDB036156
US20250074910, Example 52-1
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C35H47FN6O4
634.797000
JCSYPMMVTMTSPG-CIDHCYHYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725762; PubChem:CID176456321
Local ready
Direct docking supported
E3L036157
BDB036157
US20250074910, Example 52-2
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC4CCC3CC43COC(=O)C3)CC2)C1)C(C)C
C35H47FN6O4
634.797000
JCSYPMMVTMTSPG-DVAOISOESA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725763; PubChem:CID176456322
Local ready
Direct docking supported
E3L036158
BDB036158
US20250074910, Example 52-1b
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@@H]3CC4CC[C@@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H47FN6O4
634.797000
JCSYPMMVTMTSPG-VRDWFTASSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725764; PubChem:CID176456323
Local ready
Direct docking supported
E3L036159
BDB036159
US20250074910, Example 52-2a
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC4CC[C@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H47FN6O4
634.797000
JCSYPMMVTMTSPG-RQLAYIIUSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725765; PubChem:CID176456324
Local ready
Direct docking supported
E3L036160
BDB036160
US20250074910, Example 52-2b
CC(C)N(C(=O)c1cc(F)ccc1Oc1nncnc1N1CC2(CCN(C[C@H]3CC4CC[C@@H]3CC43COC(=O)C3)CC2)C1)C(C)C
C35H47FN6O4
634.797000
JCSYPMMVTMTSPG-WIPDQZLISA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM725766; PubChem:CID176456325
Local ready
Direct docking supported