E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038121
BDB038121
US12310975, Example 349
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@H](COc5ccc(C(=O)NC6CCC(=O)NC6=O)nc5)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C35H38ClN9O8
748.197000
KBBRPIVOTSKVAW-ZZHFZYNASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743808; PubChem:CID156292340
Local ready
Direct docking supported
E3L038122
BDB038122
US12310975, Example 350
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@H](COc5ccc(C(=O)NC6CCC(=O)NC6=O)c(F)c5)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C36H38ClFN8O8
765.199000
DGCHVCWRGLMKCM-DCCUJTHKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743809; PubChem:CID156292339
Local ready
Direct docking supported
E3L038123
BDB038123
US12310975, Example 351
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@H](COc5ccc(C(=O)NC6CCC(=O)NC6=O)c(OC)c5)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C37H41ClN8O9
777.235000
UOEUXWAQNQOVNC-BXXZMZEQSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743810; PubChem:CID156292367
Local ready
Direct docking supported
E3L038124
BDB038124
US12310975, Example 353
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CCN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
DGJFLKFBNGYWPD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743811; PubChem:CID156292368
Local ready
Direct docking supported
E3L038125
BDB038125
US12310975, Example 354
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cc(F)c(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H46ClFN10O7
833.322000
AIFIHWQXYFVMIQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743812; PubChem:CID156292676
Local ready
Direct docking supported
E3L038126
BDB038126
US12310975, Example 355
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)N(CC5CCN(c6cccc(C(=O)NC7CCC(=O)NC7=O)c6F)CC5)[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C41H48ClFN10O6
831.350000
DORUQPFXAXHNMO-QBONCRILSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743813; PubChem:CID156292677
Local ready
Direct docking supported
E3L038127
BDB038127
US12310975, Example 356
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6cc(OC)cc(C(=O)NC7CCC(=O)NC7=O)c6F)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H50ClFN10O7
861.376000
GVVPJJLYZUAITE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743814; PubChem:CID156292675
Local ready
Direct docking supported
E3L038128
BDB038128
US12310975, Example 357
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN([C@@H]5C[C@@H](COc6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)N(C)C5)CC4)ncc3Cl)ccc21
C41H45ClN10O8
841.326000
COZVJQCFBZUVHE-RCVNQITKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743815; PubChem:CID156278360
Local ready
Direct docking supported
E3L038129
BDB038129
US12310975, Example 358
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC(C)C)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H51ClN10O7
843.386000
XCXVNBVCEHYPHC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743816; PubChem:CID176370923
Local ready
Direct docking supported
E3L038130
BDB038130
US12310975, Example 359
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cnc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H46ClN11O7
816.320000
FANDXCJBIQTYAY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743817; PubChem:CID176370960
Local ready
Direct docking supported
E3L038131
BDB038131
US12310975, Example 360
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(c6nc(C(=O)NC7CCC(=O)NC7=O)cs6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C37H43ClN10O6S
791.335000
ZBXLIBYRJRYQCB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743818; PubChem:CID156292881
Local ready
Direct docking supported
E3L038132
BDB038132
US12310975, Example 361
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(c6ccc(C(=O)NC7CCC(=O)NC7=O)o6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H44ClN9O7
774.279000
XNSVBJORJYCKMC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743819; PubChem:CID156292877
Local ready
Direct docking supported
E3L038133
BDB038133
US12310975, Example 362
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CC6(C5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H46ClN9O8
852.349000
BKVSQNWOTHZRPL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743820; PubChem:CID176734220
Local ready
Direct docking supported
E3L038134
BDB038134
US12310975, Example 363
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CC6(C5)CN(c5cccc7c5C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H46ClN9O8
852.349000
MUOSJAJESOWHNR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743821; PubChem:CID176370937
Local ready
Direct docking supported
E3L038135
BDB038135
US12310975, Example 364
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(CN5CCC(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H46ClN9O7
824.339000
SBXPVOAXZOXXLT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743822; PubChem:CID156292887
Local ready
Direct docking supported
E3L038136
BDB038136
US12310975, Example 365
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O7
838.366000
KBISHBUQIIOWPW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743823; PubChem:CID156292892
Local ready
Direct docking supported
E3L038137
BDB038137
US12310975, Example 366
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(F)(CN5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H46ClFN10O7
833.322000
SNRLTXSVLPYQME-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743824; PubChem:CID156292886
Local ready
Direct docking supported
E3L038138
BDB038138
US12310975, Example 367
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5(F)CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H46ClFN10O7
833.322000
UYOPQHUCAKXDTJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743825; PubChem:CID176370993
Local ready
Direct docking supported
E3L038139
BDB038139
US12310975, Example 368
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cc(OC)c(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H49ClN10O8
845.358000
XVIBKAMKMPERJB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743826; PubChem:CID176371059
Local ready
Direct docking supported
E3L038140
BDB038140
US12310975, Example 369
CN1C(=O)CCc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C37H40ClN9O5
726.238000
QYSFWVAUNNUFAI-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743827; PubChem:CID176371213
Local ready
Direct docking supported