E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038141
BDB038141
US12310975, Example 370
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5[C@H](C)CN(c6cccc(C(=O)NC7CCC(=O)NC7=O)c6F)C[C@@H]5C)CC4)ncc3Cl)ccc2n(C)c1=O
C41H48ClFN10O6
831.350000
DMWYTIZFYLGKKO-QBONCRILSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743828; PubChem:CID156293084
Local ready
Direct docking supported
E3L038142
BDB038142
US12310975, Example 371
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN([C@H]5C[C@H](COc6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)N(C)C5)CC4)ncc3Cl)ccc21
C41H45ClN10O8
841.326000
COZVJQCFBZUVHE-YNYZQZDBSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743829; PubChem:CID156293085
Local ready
Direct docking supported
E3L038143
BDB038143
US12310975, Example 372
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC6(CC5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
KSAGXSFABAFYME-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743830; PubChem:CID156278413
Local ready
Direct docking supported
E3L038144
BDB038144
US12310975, Example 373
CNC(=O)COc1cc2cc(Nc3nc(NCCc4ccc(C(=O)NC5CCC(=O)NC5=O)nc4)ncc3Cl)ccc2n(C(C)C)c1=O
C32H34ClN9O6
676.134000
VDRMIWXFDBBWNP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743831; PubChem:CID156293083
Local ready
Direct docking supported
E3L038145
BDB038145
US12310975, Example 374
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CC6(CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
CMOABCOJTIVXTH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743832; PubChem:CID156292893
Local ready
Direct docking supported
E3L038146
BDB038146
US12310975, Example 375
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc21
C41H49ClN10O7
829.359000
WPHXFOYLHQNTEZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743833; PubChem:CID156292888
Local ready
Direct docking supported
E3L038147
BDB038147
US12310975, Example 376
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C42H51ClN10O7
843.386000
MVMRRYAHCKUUGT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743834; PubChem:CID156292885
Local ready
Direct docking supported
E3L038148
BDB038148
US12310975, Example 377
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)[n+]([O-])c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H44ClN11O7
802.293000
YQJIDRAXPXOJBT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743835; PubChem:CID156292668
Local ready
Direct docking supported
E3L038149
BDB038149
US12310975, Example 378
CN1C(=O)CCc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C37H40ClN9O5
726.238000
RRISMSRAYBYKOW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743836; PubChem:CID156292669
Local ready
Direct docking supported
E3L038150
BDB038150
US12310975, Example 379
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@H](CCOc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C38H39ClN8O9
787.230000
XLFKZESBCIINNR-OEXUWWALSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743837; PubChem:CID156292665
Local ready
Direct docking supported
E3L038151
BDB038151
US12310975, Example 380
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCCN5c5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C41H45ClN10O7
825.327000
GUTXYEYQXLFATN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743838; PubChem:CID176370934
Local ready
Direct docking supported
E3L038152
BDB038152
US12310975, Example 381
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5[C@H](C)CN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)C[C@@H]5C)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C44H51ClN10O7
867.408000
GVBDMPMHWQMAKP-BYGMXFQISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743839; PubChem:CID156291602
Local ready
Direct docking supported
E3L038153
BDB038153
US12310975, Example 382
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](COc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)O[C@H](C)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C38H39ClN8O9
787.230000
TYSHELSPMGBLFY-SXSJHBJDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743840; PubChem:CID156278516
Local ready
Direct docking supported
E3L038154
BDB038154
US12310975, Example 383
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](COc5ccc6c(c5)C(=O)N(C5CCC(=O)NC5=O)C6=O)O[C@@H](C)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C38H39ClN8O9
787.230000
TYSHELSPMGBLFY-IYBSEAIPSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743841; PubChem:CID156729473
Local ready
Direct docking supported
E3L038155
BDB038155
US12310975, Example 384
CNC(=O)COc1cc2cc(Nc3nc(N4CCC5(CC4)CN(CC4CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC4)C5)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
JGHMAUHVAZMGSX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743842; PubChem:CID156292460
Local ready
Direct docking supported
E3L038156
BDB038156
US12310975, Example 385
CNC(=O)COc1cc2cc(Nc3nc(N4CCC5(CC4)CN(CC4CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC4)C5)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
TVLIAJDSMCUNCY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743843; PubChem:CID156292450
Local ready
Direct docking supported
E3L038157
BDB038157
US12310975, Example 386
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O7
838.366000
OLBQTHPOGKKRPW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743844; PubChem:CID156278403
Local ready
Direct docking supported
E3L038158
BDB038158
US12310975, Example 387
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)N(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)[C@@H](C)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C44H51ClN10O7
867.408000
COWAUCSFCBROBZ-BYGMXFQISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743845; PubChem:CID176370963
Local ready
Direct docking supported
E3L038159
BDB038159
US12310975, Example 388
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C42H49ClN10O6
825.371000
XKXJWIPUGPMDBM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743846; PubChem:CID156291874
Local ready
Direct docking supported
E3L038160
BDB038160
US12310975, Example 389
CC[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C(C)C)n2)C[C@@H](COc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)O1
C39H41ClN8O9
801.257000
RUXQKAMJQJUFLM-CGYACHGYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743847; PubChem:CID156292397
Local ready
Direct docking supported