E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038101
BDB038101
US12310975, Example 329
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(OCC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H46ClN9O8
840.338000
WZSVCLKINRELIG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743788; PubChem:CID176734217
Local ready
Direct docking supported
E3L038102
BDB038102
US12310975, Example 330
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(OCC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H46ClN9O8
840.338000
LURIOPCDDGBAAT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743789; PubChem:CID176371008
Local ready
Direct docking supported
E3L038103
BDB038103
US12310975, Example 331
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(COC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H46ClN9O8
840.338000
MFQFJJLOIRJHQA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743790; PubChem:CID156292693
Local ready
Direct docking supported
E3L038104
BDB038104
US12310975, Example 332
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(COC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H46ClN9O8
840.338000
UPZRWWJQXDKZPT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743791; PubChem:CID176371082
Local ready
Direct docking supported
E3L038105
BDB038105
US12310975, Example 333
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(CCC2CC2)c1=O
C44H49ClN10O7
865.392000
LBSDKEDOGGAJKF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743792; PubChem:CID156292697
Local ready
Direct docking supported
E3L038106
BDB038106
US12310975, Example 334
CNC(=O)COc1cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(CCC2CC2)c1=O
C40H41ClN8O8
797.269000
XYPXZBNXNHHOMP-QASNXKAYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743793; PubChem:CID176371053
Local ready
Direct docking supported
E3L038107
BDB038107
US12310975, Example 335
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3C)ccc2n(C)c1=O
C42H48N10O7
804.909000
HMNPJJDSMGGOJM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743794; PubChem:CID176734218
Local ready
Direct docking supported
E3L038108
BDB038108
US12310975, Example 336
CNC(=O)COc1cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(C2CC2)c1=O
C38H37ClN8O8
769.215000
TVNVGGINIBKOTH-SVQMELKDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743795; PubChem:CID156278462
Local ready
Direct docking supported
E3L038109
BDB038109
US12310975, Example 337
CCC(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)N1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1
C42H47ClN10O7
839.354000
IBNXTBFBOFIWGV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743796; PubChem:CID156292904
Local ready
Direct docking supported
E3L038110
BDB038110
US12310975, Example 338
CCCC(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)N1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1
C43H49ClN10O7
853.381000
BRTQHPMVTJGLOO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743797; PubChem:CID156292905
Local ready
Direct docking supported
E3L038111
BDB038111
US12310975, Example 339
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5(F)CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClFN10O7
829.290000
OVUVQWQIAKEJCB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743798; PubChem:CID156292899
Local ready
Direct docking supported
E3L038112
BDB038112
US12310975, Example 340
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(F)(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClFN10O7
829.290000
QDHULOMGMVYVCU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743799; PubChem:CID176734219
Local ready
Direct docking supported
E3L038113
BDB038113
US12310975, Example 341
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5(F)CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClFN10O7
829.290000
UCPCKXMSKPDHIZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743800; PubChem:CID176370965
Local ready
Direct docking supported
E3L038114
BDB038114
US12310975, Example 342
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(F)(CN5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClFN10O7
829.290000
TWMFDIIUVJCODV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743801; PubChem:CID156292283
Local ready
Direct docking supported
E3L038115
BDB038115
US12310975, Example 343
CNC(=O)COc1cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(C2CCCCC2)c1=O
C41H43ClN8O8
811.296000
YTXDFYPJMFRLJG-IHOKFDBFSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743802; PubChem:CID176370947
Local ready
Direct docking supported
E3L038116
BDB038116
US12310975, Example 344
CCOc1cc(N2CCC(CN3CCN(c4ncc(Cl)c(Nc5ccc6c(c5)cc(OCC(=O)NC)c(=O)n6C)n4)CC3)CC2)ccc1C(=O)NC1CCC(=O)NC1=O
C41H49ClN10O7
829.359000
WKGHTIOPZQCDOI-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743803; PubChem:CID176371021
Local ready
Direct docking supported
E3L038117
BDB038117
US12310975, Example 345
CCCOc1cc(N2CCC(CN3CCN(c4ncc(Cl)c(Nc5ccc6c(c5)cc(OCC(=O)NC)c(=O)n6C)n4)CC3)CC2)ccc1C(=O)NC1CCC(=O)NC1=O
C42H51ClN10O7
843.386000
OETFUKKPDCIWNW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743804; PubChem:CID176370964
Local ready
Direct docking supported
E3L038118
BDB038118
US12310975, Example 346
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)N(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C42H51ClN10O7
843.386000
HYGXDBSLPALONR-FCLIONODSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743805; PubChem:CID176370940
Local ready
Direct docking supported
E3L038119
BDB038119
US12310975, Example 347
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5[C@H](C)CN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)C[C@@H]5C)CC4)ncc3Cl)ccc2n(C)c1=O
C42H51ClN10O7
843.386000
VNCLJTVQVPSGKV-FCLIONODSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743806; PubChem:CID156292337
Local ready
Direct docking supported
E3L038120
BDB038120
US12310975, Example 348
CNC(=O)COc1cc2cc(Nc3nc(N4CCO[C@H](COc5ccc(C(=O)NC6CCC(=O)NC6=O)cc5)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C36H39ClN8O8
747.209000
CZIKJOGWLFJFCG-PVCWFJFTSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743807; PubChem:CID156292338
Local ready
Direct docking supported