E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038081
BDB038081
US12310975, Example 309
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(OC5CN(CC6CN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)C6)C5)CC4)ncc3Cl)ccc21
C43H47ClN10O8
867.364000
VFJPHVNTSFCKIY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743768; PubChem:CID156291893
Local ready
Direct docking supported
E3L038082
BDB038082
US12310975, Example 310
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C41H45ClN10O7
825.327000
RFMJERLFWWZBKX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743769; PubChem:CID156291892
Local ready
Direct docking supported
E3L038083
BDB038083
US12310975, Example 311
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C42H47ClN10O7
839.354000
MCCREUSDPMQOCS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743770; PubChem:CID156291895
Local ready
Direct docking supported
E3L038084
BDB038084
US12310975, Example 312
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C43H49ClN10O7
853.381000
VYVHRICYTGLKCF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743771; PubChem:CID176370952
Local ready
Direct docking supported
E3L038085
BDB038085
US12310975, Example 313
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C43H51ClN10O6
839.398000
JCTKFGGCGSZVOM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743772; PubChem:CID156292672
Local ready
Direct docking supported
E3L038086
BDB038086
US12310975, Example 314
CCCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C42H47ClN10O7
839.354000
JZMZVMHYMVDGOY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743773; PubChem:CID156292671
Local ready
Direct docking supported
E3L038087
BDB038087
US12310975, Example 315
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H51ClN10O7
843.386000
ZFJIKAYRUVLGQM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743774; PubChem:CID156292874
Local ready
Direct docking supported
E3L038088
BDB038088
US12310975, Example 316
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(CN5CC(C6CN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)C6)C5)CC4)ncc3Cl)ccc21
C43H47ClN10O7
851.365000
ZXLCBFOAQBRDKQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743775; PubChem:CID156292873
Local ready
Direct docking supported
E3L038089
BDB038089
US12310975, Example 317
CCCCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C43H49ClN10O7
853.381000
ZUDFUTLMJXYRRA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743776; PubChem:CID156292875
Local ready
Direct docking supported
E3L038090
BDB038090
US12310975, Example 318
CCCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc21
C38H39ClN8O8
771.231000
MAABCFIRGJRXII-LWAJAQLZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743777; PubChem:CID176370971
Local ready
Direct docking supported
E3L038091
BDB038091
US12310975, Example 319
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc(C(=O)NC7CCC(=O)NC7=O)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H45ClN10O6
785.306000
QCGWFZZYMHNDEC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743778; PubChem:CID176371036
Local ready
Direct docking supported
E3L038092
BDB038092
US12310975, Example 320
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc(C(=O)NC7CCC(=O)NC7=O)n6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H44ClN11O6
786.294000
RJYVZLFSHSOYGG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743779; PubChem:CID156292296
Local ready
Direct docking supported
E3L038093
BDB038093
US12310975, Example 321
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CCN5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H44ClN11O7
826.315000
YCBOECKOJXSPOD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743780; PubChem:CID156292299
Local ready
Direct docking supported
E3L038094
BDB038094
US12310975, Example 322
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CCC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H45ClN10O7
825.327000
NWLRBGYEJVTUBH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743781; PubChem:CID156292880
Local ready
Direct docking supported
E3L038095
BDB038095
US12310975, Example 323
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C2CC2)c1=O
C42H45ClN10O7
837.338000
XTQJJGXSMYTCBR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743782; PubChem:CID156292878
Local ready
Direct docking supported
E3L038096
BDB038096
US12310975, Example 324
CCCCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc21
C39H41ClN8O8
785.258000
BBFLPBJNUGTJOG-XYXHBKGXSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743783; PubChem:CID176371102
Local ready
Direct docking supported
E3L038097
BDB038097
US12310975, Example 325
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc(C(=O)NC7CCC(=O)NC7=O)c6OC)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H47ClN10O7
815.332000
AZKRTNOLZHTWCT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743784; PubChem:CID176370944
Local ready
Direct docking supported
E3L038098
BDB038098
US12310975, Example 326
CCN(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1
C42H47ClN10O7
839.354000
CKKJBCKBPPENJT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743785; PubChem:CID176370928
Local ready
Direct docking supported
E3L038099
BDB038099
US12310975, Example 327
CCCN(C1CCN(c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)cc(OCC(=O)NC)c(=O)n4C)n2)CC1
C43H49ClN10O7
853.381000
FDUWBJQDRBYNFU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743786; PubChem:CID176370926
Local ready
Direct docking supported
E3L038100
BDB038100
US12310975, Example 328
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCC(OC5CN(C6CN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)C6)C5)CC4)ncc3Cl)ccc21
C42H45ClN10O8
853.337000
OSZYUEXCINGSQD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743787; PubChem:CID176734216
Local ready
Direct docking supported