E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L004001
BDB004001
2-Methyl-3-(piperidin-1-yl)propanoic acid
CC(CN1CCCCC1)C(=O)O
C9H17NO2
171.240000
FNXJEHJSDJHSFC-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89498; PubChem:CID4739598
Local ready
Direct docking supported
E3L004002
BDB004002
3-(1H-1,3-benzodiazol-1-yl)-2-methylpropanoic acid
CC(Cn1cnc2ccccc21)C(=O)O
C11H12N2O2
204.229000
NIIJKDXDTQPYOQ-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89499; PubChem:CID2911125
Local ready
Direct docking supported
E3L004003
BDB004003
2-Methyl-3-(1-phenylethylamino)propanoic acid
CC(CNC(C)c1ccccc1)C(=O)O
C12H17NO2
207.273000
RLDYLNBTVOECPS-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89500; PubChem:CID2826778
Local ready
Direct docking supported
E3L004004
BDB004004
BDBM89501
Cc1nn(CC(C)C(=O)O)c(C)c1C
C10H16N2O2
196.250000
FSZIWKPHMFVUFJ-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89501; PubChem:CID3162903
Local ready
Direct docking supported
E3L004005
BDB004005
2-Methyl-3-(2-methyl-benzoimidazol-1-yl)-propionic acid
Cc1nc2ccccc2n1CC(C)C(=O)O
C12H14N2O2
218.256000
NCUQGGHIAQQHRV-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89502; PubChem:CID6484149
Local ready
Direct docking supported
E3L004006
BDB004006
3-(1H-1,2,3-benzotriazol-1-yl)-2-methylpropanoic acid
CC(Cn1nnc2ccccc21)C(=O)O
C10H11N3O2
205.217000
DQDZZJOQSXHOES-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89504; PubChem:CID2913712
Local ready
Direct docking supported
E3L004007
BDB004007
1-(1H-pyrazol-1-ylmethyl)cyclopropanecarboxylic acid
O=C(O)C1(Cn2cccn2)CC1
C8H10N2O2
166.180000
PAWQPEDNWKHQNR-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89505; PubChem:CID37134560
Local ready
Direct docking supported
E3L004008
BDB004008
BDBM89506
COc1ccccc1C1=NOC(C(=O)O)C1
C11H11NO4
221.212000
DZQPCQZVKAAAJK-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89506; PubChem:CID2978658
Local ready
Direct docking supported
E3L004009
BDB004009
2-Methyl-3-pyrrolidin-1-ylpropanoic acid
CC(CN1CCCC1)C(=O)O
C8H15NO2
157.213000
SJQNPHPIINSWQH-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89507; PubChem:CID43538707
Local ready
Direct docking supported
E3L004010
BDB004010
2-Methyl-3-morpholin-4-ylpropanoic acid
CC(CN1CCOCC1)C(=O)O
C8H15NO3
173.212000
OGBNXJIZUXXODH-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM89508; PubChem:CID652896
Local ready
Direct docking supported
E3L004011
BDB004011
2-(4-Fluorophenyl)-4h-chromen-4-one
O=c1cc(-c2ccc(F)cc2)oc2ccccc12
C15H9FO2
240.233000
ZHXIMGYEMBZGOI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM89825; PubChem:CID261391
Local ready
Direct docking supported
E3L004012
BDB004012
Amorfrutin A
COc1cc(CCc2ccccc2)c(C(=O)O)c(O)c1CC=C(C)C
C21H24O4
340.419000
CTNFTPUIYFUXBE-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM91427; PubChem:CID17950432
Local ready
Direct docking supported
E3L004013
BDB004013
Sto-609
O=C(O)c1ccc2c3c1cccc3c(=O)n1c3ccccc3nc21
C19H10N2O3
314.300000
MYKOWOGZBMOVBJ-UHFFFAOYSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM92455; PubChem:CID3467590
Local ready
Direct docking supported
E3L004014
BDB004014
Di-N-desethylamiodarone
CCCCc1oc2ccccc2c1C(=O)c1cc(I)c(OCCN)c(I)c1
C21H21I2NO3
589.211000
ZOCLVGHDXBVATF-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM92786; PubChem:CID125134
Local ready
Direct docking supported
E3L004015
BDB004015
BDBM92787
CCCCc1oc2ccccc2c1C(=O)c1cc(I)c(OCC[N+](C)(C)C)c(I)c1
C24H28I2NO3+
632.300000
CPUKLBDTNMMBMC-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 5A, Lysine-specific demethylase 7A, Lysine-specific demethylase PHF2
BindingDB, PubChem
BindingDB:BDBM92787; PubChem:CID70702120
Local ready
Direct docking supported
E3L004016
BDB004016
BDBM92788
CCCCc1oc2ccccc2c1C(=O)c1cc(I)c(OCCC[N+](C)(C)C)c(I)c1
C25H30I2NO3+
646.327000
SOFIRHJYYHVQEA-UHFFFAOYSA-N O75151, P29375, Q6ZMT4, Q9H160 Inhibitor of growth protein 2, Lysine-specific demethylase PHF2, Lysine-specific demethylase 5A, Lysine-specific demethylase 7A
BindingDB, PubChem
BindingDB:BDBM92788; PubChem:CID70702122
Local ready
Direct docking supported
E3L004017
BDB004017
Bisanilinopyrimidine, 3a
NOc1ccccc1Nc1nccc(Nc2ccccc2C(=O)O)n1
C17H15N5O3
337.339000
CNPGGULOTCOTCG-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM92790; PubChem:CID70702123
Local ready
Direct docking supported
E3L004018
BDB004018
Bisanilinopyrimidine, 3d
O=C(O)c1ccccc1Nc1ccnc(Nc2ccccc2C(=O)O)n1
C18H14N4O4
350.334000
JRXBMCCODQDYEB-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM92791; PubChem:CID1398004
Local ready
Direct docking supported
E3L004019
BDB004019
Bisanilinopyrimidine, 3e
COC(=O)c1ccc(Nc2nccc(Nc3ccccc3C(=O)OC)n2)cc1
C20H18N4O4
378.388000
BOXJYFLYJAOIIZ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM92792; PubChem:CID70702124
Local ready
Direct docking supported
E3L004020
BDB004020
BDBM92793
NC(=O)c1ccc(Nc2nccc(Nc3ccccc3C(N)=O)n2)cc1
C18H16N6O2
348.366000
DYZNHQCKJOEZRJ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM92793; PubChem:CID60138156
Local ready
Direct docking supported