E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L040641
BDB040641
BDBM761446
[2H]C1([2H])NC([2H])([2H])C([2H])([2H])N(c2cc3c(cc2F)C(=O)N(C2CCC(=O)NC2=O)C3=O)C1([2H])[2H]
C17H17FN4O4
368.393814
YNGDWIBEYDEYGU-SQUIKQQTSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM761446; PubChem:CID172209952
Local ready
Direct docking supported
E3L040642
BDB040642
BDBM761447
O=C1CCC(N2C(=O)c3ccc(N4CC5CCC4CN5)cc3C2=O)C(=O)N1
C19H20N4O4
368.393000
UKPZIBLMTKJJJV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM761447; PubChem:CID165946818
Local ready
Direct docking supported
E3L040643
BDB040643
BDBM762511
O=c1c2c(Nc3ccc(I)cc3F)cncc2ccn1C[C@@H](O)CO
C17H15FIN3O3
455.227000
IDEWSJRLCBJTLX-GFCCVEGCSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762511; PubChem:CID147895382
Local ready
Direct docking supported
E3L040644
BDB040644
BDBM762512
O=c1c2c(Nc3ccc(I)cc3F)cncc2ccn1C[C@H](O)CO
C17H15FIN3O3
455.227000
IDEWSJRLCBJTLX-LBPRGKRZSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762512; PubChem:CID147895383
Local ready
Direct docking supported
E3L040645
BDB040645
BDBM762513
NCCCn1ccc2cncc(Nc3ccc(I)cc3F)c2c1=O
C17H16FIN4O
438.244000
JRHFMDUXQBSIPQ-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762513; PubChem:CID148110942
Local ready
Direct docking supported
E3L040646
BDB040646
BDBM762515
O=C(O)Cn1ccc2cncc(Nc3ccc(I)cc3F)c2c1=O
C16H11FIN3O3
439.184000
DGLHJWQEOBFOEH-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762515; PubChem:CID147356666
Local ready
Direct docking supported
E3L040647
BDB040647
BDBM762516
COC(=O)Cn1ccc2cncc(Nc3ccc(I)cc3F)c2c1=O
C17H13FIN3O3
453.211000
FGWGHRIVKMAJLF-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762516; PubChem:CID147498049
Local ready
Direct docking supported
E3L040648
BDB040648
BDBM762517
O=c1c2c(Nc3ccc(I)cc3F)cncc2ccn1O
C14H9FIN3O2
397.147000
YOQLQKYGYGPPSO-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762517; PubChem:CID149397023
Local ready
Direct docking supported
E3L040649
BDB040649
BDBM762518
O=c1c2c(Nc3ccc(I)cc3F)cncc2ccn1OCCO
C16H13FIN3O3
441.200000
FFVCAWOCVGAVGC-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762518; PubChem:CID147492599
Local ready
Direct docking supported
E3L040650
BDB040650
BDBM762519
O=C1c2c(cncc2Nc2ccc(I)cc2F)CCN1OCCO
C16H15FIN3O3
443.216000
VCDKRXDAIHWAIJ-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762519; PubChem:CID153022136
Local ready
Direct docking supported
E3L040651
BDB040651
BDBM762520
CCON1CCc2cncc(Nc3ccc(I)cc3F)c2C1=O
C16H15FIN3O2
427.217000
BLCVWLJYBUZVMT-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762520; PubChem:CID147103564
Local ready
Direct docking supported
E3L040652
BDB040652
BDBM762521
O=C1NCCc2cncc(Nc3ccc(I)cc3F)c21
C14H11FIN3O
383.164000
FUGXXWZBNLPKHX-UHFFFAOYSA-N Q13233 Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM762521; PubChem:CID147569773
Local ready
Direct docking supported
E3L040653
BDB040653
US20250257055, Example 1
O=C1N[C@]2(CCc3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cc1)C1(C(F)(F)F)COC1
C33H32F4N6O5
668.648000
ACMLFDGZWOXKDL-YTTGMZPUSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764564; PubChem:CID176861994
Local ready
Direct docking supported
E3L040654
BDB040654
US20250257055, Example 2
CN1CC(F)(Cn2cc(-c3ccc4c(c3)CC[C@]43NC(=O)N(CC(=O)N(Cc4ccc(F)cc4)C4(C(F)(F)F)COC4)C3=O)cn2)C1
C32H31F5N6O4
658.628000
FCKNZOUTYCLFSY-HKBQPEDESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764565; PubChem:CID176862010
Local ready
Direct docking supported
E3L040655
BDB040655
US20250257055, Example 3
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cc1)C1(C(F)(F)F)COC1
C33H31F5N6O5
686.638000
MRECOMFGRKBNFR-ZUKKLESISA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764566; PubChem:CID176862012
Local ready
Direct docking supported
E3L040656
BDB040656
US20250257055, Example 4
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cc1)C1(C(F)(F)F)CC(F)(F)C1
C34H31F7N6O4
720.646000
BKCHTXXAFMJELI-SYBRLPANSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764567; PubChem:CID176861988
Local ready
Direct docking supported
E3L040657
BDB040657
US20250257055, Example 5
O=C1N[C@]2(CCc3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cc1)C1(C(F)(F)F)CC(F)(F)C1
C34H32F6N6O4
702.656000
LQHXVSXJYDRTMV-XIFFEERXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764568; PubChem:CID176861970
Local ready
Direct docking supported
E3L040658
BDB040658
US20250257055, Example 6
O=C1N[C@]2(CCc3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cn1)C1(C(F)(F)F)COC1
C32H31F4N7O5
669.636000
NEJWEYMAGKTECX-HKBQPEDESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764569; PubChem:CID176862005
Local ready
Direct docking supported
E3L040659
BDB040659
US20250257055, Example 7
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cn1)C1(C(F)(F)F)COC1
C32H30F5N7O5
687.626000
MWZMDGHSCHBFBT-NEEKEDPPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764570; PubChem:CID176861980
Local ready
Direct docking supported
E3L040660
BDB040660
US20250257055, Example 8
O=C1N[C@]2(CCc3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cn1)C1(C(F)(F)F)CC(F)(F)C1
C33H31F6N7O4
703.644000
HJWGZLUWFDESBA-YTTGMZPUSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764571; PubChem:CID176861972
Local ready
Direct docking supported