E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L040661
BDB040661
US20250257055, Example 9
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CN(C6COC6)C5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cn1)C1(C(F)(F)F)CC(F)(F)C1
C33H30F7N7O4
721.634000
NHHZZRLTZUGGEB-DICHSLLOSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764572; PubChem:CID176861986
Local ready
Direct docking supported
E3L040662
BDB040662
US20250257055, Example 10
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C)c5)ccc43)C2=O)(C(F)(F)F)C1
C29H27F5N6O3
602.564000
VDSIQACOIMEICT-LXFBAYGMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764573; PubChem:CID176861979
Local ready
Direct docking supported
E3L040663
BDB040663
US20250257055, Example 11
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C(C)(C)C#N)c5)ccc43)C2=O)(C(F)(F)F)C1
C32H30F5N7O3
655.628000
AOJDZTGIEQDZQT-NJHZRGNWSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764574; PubChem:CID176861995
Local ready
Direct docking supported
E3L040664
BDB040664
US20250257055, Example 12
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C)c5)ccc43)C2=O)(C(F)(F)F)C1
C29H28F4N6O3
584.574000
REJIMCLBQYAVMK-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764575; PubChem:CID176861973
Local ready
Direct docking supported
E3L040665
BDB040665
US20250257055, Example 13
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C(C)(C)C#N)c5)ccc43)C2=O)(C(F)(F)F)C1
C32H31F4N7O3
637.638000
ANNRMMKYSMNVEX-HKBQPEDESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764576; PubChem:CID176861984
Local ready
Direct docking supported
E3L040666
BDB040666
US20250257055, Example 14
CN1CCn2ncc(-c3ccc4c(c3)[C@H](F)C[C@]43NC(=O)N(CC(=O)N(Cc4ccc(F)cc4)C4(C(F)(F)F)COC4)C3=O)c2C1
C31H29F5N6O4
644.601000
LCZQNVZZLYLCLI-HLADLETHSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764577; PubChem:CID176865794
Local ready
Direct docking supported
E3L040667
BDB040667
US20250257055, Example 15
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C)c5F)ccc43)C2=O)(C(F)(F)F)C1
C29H26F6N6O3
620.554000
NHCPFAJXHXYDCP-DFHRPNOPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764578; PubChem:CID176862014
Local ready
Direct docking supported
E3L040668
BDB040668
US20250257055, Example 16
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C)c5F)ccc43)C2=O)(C(F)(F)F)C1
C29H27F5N6O3
602.564000
FMIRMIPUPDECHV-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764579; PubChem:CID176861997
Local ready
Direct docking supported
E3L040669
BDB040669
US20250257055, Example 17
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cn(C)nc5F)ccc43)C2=O)(C(F)(F)F)C1
C29H26F6N6O3
620.554000
ASOVGHSPVKESKS-DFHRPNOPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764580; PubChem:CID176862003
Local ready
Direct docking supported
E3L040670
BDB040670
US20250257055, Example 18
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cn(C)nc5F)ccc43)C2=O)(C(F)(F)F)C1
C29H27F5N6O3
602.564000
KIRQWNADLAWJTG-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764581; PubChem:CID176861964
Local ready
Direct docking supported
E3L040671
BDB040671
US20250257055, Example 19
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CCOCC5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cc1)C1(C(F)(F)F)COC1
C32H30F5N5O5
659.612000
ZNFXEHJDPNRFMN-NEEKEDPPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764582; PubChem:CID176861975
Local ready
Direct docking supported
E3L040672
BDB040672
US20250257055, Example 20
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C)c5)ccc43)C2=O)(C(F)(F)F)C1
C28H26F5N7O3
603.552000
QIKLULUJXFBMBV-AMGIVPHBSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764583; PubChem:CID176861998
Local ready
Direct docking supported
E3L040673
BDB040673
US20250257055, Example 21
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C)c5)ccc43)C2=O)(C(F)(F)F)C1
C28H27F4N7O3
585.562000
PGCBJOXPRLCONN-MHZLTWQESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764584; PubChem:CID176862013
Local ready
Direct docking supported
E3L040674
BDB040674
US20250257055, Example 22
CN(C)C1(Cn2cc(-c3ccc4c(c3)[C@H](F)C[C@]43NC(=O)N(CC(=O)N(Cc4ccc(F)cc4)C4(C(F)(F)F)COC4)C3=O)cn2)COC1
C33H33F5N6O5
688.654000
UCNFUINEYOUUSJ-DICHSLLOSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764585; PubChem:CID176861996
Local ready
Direct docking supported
E3L040675
BDB040675
US20250257055, Example 23
O=C1N[C@]2(C[C@@H](F)c3cc(-c4cnn(C5CCN(C6COC6)CC5)c4)ccc32)C(=O)N1CC(=O)N(Cc1ccc(F)cn1)C1(C(F)(F)F)COC1
C34H34F5N7O5
715.680000
ZWZNTJUYYCDESL-YDYNHKSESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764586; PubChem:CID176861978
Local ready
Direct docking supported
E3L040676
BDB040676
US20250257055, Example 24
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C6COC6)c5)ccc43)C2=O)(C(F)(F)F)C1
C30H28F5N7O4
645.589000
SSURUOLEEBBOFE-GIGWZHCTSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764587; PubChem:CID176861976
Local ready
Direct docking supported
E3L040677
BDB040677
US20250257055, Example 25
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(CC6COC6)c5)ccc43)C2=O)(C(F)(F)F)C1
C31H30F5N7O4
659.616000
QKXMJDAHBMDGDO-RNAHPLFWSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764588; PubChem:CID176862007
Local ready
Direct docking supported
E3L040678
BDB040678
US20250257055, Example 26
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C(C)(C)C#N)c5)ccc43)C2=O)(C(F)(F)F)C1
C31H29F5N8O3
656.616000
RHYAIWXUDDAZRD-HLADLETHSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764589; PubChem:CID176861974
Local ready
Direct docking supported
E3L040679
BDB040679
US20250257055, Example 27
CN1CC(N(Cc2ccc(F)cn2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C(C)(C)CO)c5)ccc43)C2=O)(C(F)(F)F)C1
C31H32F5N7O4
661.632000
NECOUNXTTAVFPN-HLADLETHSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764590; PubChem:CID176862017
Local ready
Direct docking supported
E3L040680
BDB040680
US20250257055, Example 29
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(C[C@@H](F)c4cc(-c5cnn(C)c5)c(F)cc43)C2=O)(C(F)(F)F)C1
C29H26F6N6O3
620.554000
QOWVZONOCYVEKT-LXFBAYGMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM764591; PubChem:CID176861999
Local ready
Direct docking supported