E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L050541
BDB050541
propionyl-2Nal-Gly(cPent)-Lys-NHbenzhydryl
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C42H51N5O4
689.901000
CIOYQSZIMXNUIC-YFTHYISFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271300; PubChem:CID142442378
Local ready
Direct docking supported
E3L050542
BDB050542
propionyl-2Nal-Ala(tBu)-Lys-NHbenzhydryl
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@@H](CC(C)(C)C)C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1
C42H53N5O4
691.917000
GZOFFDZTXJDMBP-KVBYWJEESA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271301; PubChem:CID145960747
Local ready
Direct docking supported
E3L050543
BDB050543
BDBM50271311
CCC(=O)N[C@@H](Cc1nc2c(F)cccc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C39H47FN6O4S
714.908000
DRNWJLKVEKDFSR-BQXSUFNCSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271311; PubChem:CID142442525
Local ready
Direct docking supported
E3L050544
BDB050544
BDBM50271312
CCC(=O)N[C@@H](Cc1nc2ccc(Cl)cc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C39H47ClN6O4S
731.363000
JYDYXKCZRVSHMZ-QOIMHMMJSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271312; PubChem:CID145960525
Local ready
Direct docking supported
E3L050545
BDB050545
propionyl-2Nal-Ile-Lys-Leu-NH2
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O)[C@@H](C)CC
C34H52N6O5
624.827000
SPMKLOLTAKYFFO-WYYWQTAUSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271313; PubChem:CID145960717
Local ready
Direct docking supported
E3L050546
BDB050546
propionyl-2Nal-Chg-Lys-NHbenzhydryl
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCCC1
C43H53N5O4
703.928000
MPBMKQSLUDNFHM-HKGQQODZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271326; PubChem:CID145963348
Local ready
Direct docking supported
E3L050547
BDB050547
propionyl-2Nal-Ala(CF3)-Lys-Unk
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@@H](CC(F)(F)F)C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1
C39H44F3N5O4
703.806000
LIKWJZJNYKDVRP-ZDCRTTOTSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271327; PubChem:CID145962663
Local ready
Direct docking supported
E3L050548
BDB050548
BDBM50271328
CCC(=O)N[C@@H](Cc1nc2cc(F)ccc2s1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)C1CCCC1
C39H47FN6O4S
714.908000
BPYJEWNJCOHOLO-BLCMUDRFSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271328; PubChem:CID145961573
Local ready
Direct docking supported
E3L050549
BDB050549
cPrCO-2Nal-Ile-Lys-Leu-NH2
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)C1CC1)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
C35H52N6O5
636.838000
KHOKDGAYAONVDY-NELKFLMZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271329; PubChem:CID145962981
Local ready
Direct docking supported
E3L050550
BDB050550
isobutyryl-2Nal-Ile-Lys-Leu-NH2
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)C(C)C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
C35H54N6O5
638.854000
ZOXBZTXFUGLPQM-LTUSVDMXSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271330; PubChem:CID145962896
Local ready
Direct docking supported
E3L050551
BDB050551
butanoyl-2Nal-Ile-Lys-Leu-NH2
CCCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O)[C@@H](C)CC
C35H54N6O5
638.854000
BIWNENBYWNIGPU-IGDNGRDTSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271331; PubChem:CID145961269
Local ready
Direct docking supported
E3L050552
BDB050552
MeNHCO-2Nal-Ile-Lys-Leu-NH2
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccc2ccccc2c1)NC(=O)NC)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(N)=O
C33H51N7O5
625.815000
LMVLBCWBFXNDNZ-OZDPOCAXSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271335; PubChem:CID142442831
Local ready
Direct docking supported
E3L050553
BDB050553
propionyl-2Nal-Ile-Lys-NHPh
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)Nc1ccccc1)[C@@H](C)CC
C34H45N5O4
587.765000
OJFKSBUJODUIIY-XSSULDTOSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271336; PubChem:CID145961365
Local ready
Direct docking supported
E3L050554
BDB050554
propionyl-2Nal-Ile-Lys-NHBn
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NCc1ccccc1)[C@@H](C)CC
C35H47N5O4
601.792000
DEGVNUBLWNMDPW-OPCGVKDQSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271337; PubChem:CID145960824
Local ready
Direct docking supported
E3L050555
BDB050555
propionyl-2Nal-Ile-Lys-NHEtPh
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NCCc1ccccc1)[C@@H](C)CC
C36H49N5O4
615.819000
YYQNSNGWYTVXBW-LEOYDPMWSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271338; PubChem:CID142442662
Local ready
Direct docking supported
E3L050556
BDB050556
propionyl-2Nal-Ile-Lys-NHbenzhydryl
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1)[C@@H](C)CC
C41H51N5O4
677.890000
MZBHKBILTGBWBD-NAXWVEBKSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271339; PubChem:CID145961094
Local ready
Direct docking supported
E3L050557
BDB050557
BDBM50271340
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@H]1CCc2ccccc21)[C@@H](C)CC
C37H49N5O4
627.830000
JSAPFBCRNWYBJJ-IEIMDBBZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271340; PubChem:CID145960498
Local ready
Direct docking supported
E3L050558
BDB050558
BDBM50271341
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H]1CCCc2ccccc21)[C@@H](C)CC
C38H51N5O4
641.857000
VFDJJOWVDLNRRA-ZPIHOKHNSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM50271341
Local ready
Direct docking supported
E3L050559
BDB050559
BDBM50271342
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@H]1CCCc2ccccc21)[C@@H](C)CC
C38H51N5O4
641.857000
VFDJJOWVDLNRRA-BCSXOEPFSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM50271342
Local ready
Direct docking supported
E3L050560
BDB050560
propionyl-2Nal-Cha-Lys-NHbenzhydryl
CCC(=O)N[C@@H](Cc1ccc2ccccc2c1)C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](CCCCN)C(=O)NC(c1ccccc1)c1ccccc1
C44H55N5O4
717.955000
YGSYJXHGXAMSKA-IGMOWHQGSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50271347; PubChem:CID145961149
Local ready
Direct docking supported