E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065927
LIG000497
GS-9681
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](Oc2ccccc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C1CCCCC1
C33H44N4O4
560.739000
GUOVHJVNYPRNQS-SHUILBLCSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP
BindingDB, e3_ligand
BindingDB:BDBM13176; e3_ligand:49
Local ready
Direct docking supported
E3L065928
LIG000498
LIG000498
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](Oc2ccccc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C1CCCCC1
C33H44N4O4
560.739000
GUOVHJVNYPRNQS-SHUILBLCSA-N P98170 -
e3_ligand
e3_ligand:49
Local ready
Direct docking supported
E3L065929
LIG000499
LIG000499
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@H](Oc2ccccc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C1CCCCC1
C33H44N4O4
560.739000
GUOVHJVNYPRNQS-XIKYZZKVSA-N P98170 -
e3_ligand
e3_ligand:50
Local ready
Direct docking supported
E3L065930
LIG000500
32
O=C1CCC(N2C(=O)c3ccc(N4CCC(F)(F)C4)cc3C2=O)C(=O)N1
C17H15F2N3O4
363.320000
GUPQMVVQTAIBKG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1005
Local ready
Direct docking supported
E3L065931
LIG000501
LYG-411
Cc1cccc2c1C=C(C(=O)NCc1ccc3c(c1)CN(C1CCC(=O)NC1=O)C3=O)CO2
C25H23N3O5
445.475000
GUUBIKKETZNEJJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1354
Local ready
Direct docking supported
E3L065932
LIG000502
20a
O=C1CCC(N2C(=O)c3cccc(C4=C[C@]4(C(=O)OCC(Cl)(Cl)Cl)c4ccc(Br)cc4)c3C2=O)C(=O)N1
C25H16BrCl3N2O6
626.674000
GVMYAADQINSFHD-UCSBTNPJSA-N - -
MolGlueDB
MolGlueDB:MGDB973
Local ready
Direct docking supported
E3L065933
LIG000503
compound 4
O=C1CCC(n2cc(-c3cccs3)nn2)C(=O)N1
C11H10N4O2S
262.294000
GVPCOFMAPDQIMI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1045
Local ready
Direct docking supported
E3L065935
LIG000505
ZZ7-16-070
CC(C)S(=O)(=O)c1ccccc1Nc1nc(N[C@@H]2CCCN(C(=O)c3ccncn3)C2)ncc1Cl
C23H26ClN7O3S
516.027000
GWBZFVVTWMAQEK-MRXNPFEDSA-N - -
MolGlueDB
MolGlueDB:MGDB170
Local ready
Direct docking supported
E3L065936
LIG000506
D4
O=c1c(-c2ccccc2)cn(Cc2ccccc2)c(=O)n1Cc1ccccc1
C24H20N2O2
368.436000
GWHJFOOJHFJBHW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB889
Local ready
Direct docking supported
E3L065937
LIG000507
52
Cc1noc(C)c1-c1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C18H15N3O5
353.334000
GWTXEPYIJUYUBD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB421
Local ready
Direct docking supported
E3L065938
LIG000508
32
COc1ccc(C(C)(C)c2cc(Cl)c(OCC3CCN(C(=O)CCCCNc4ccc(C(=O)N[C@H]5CCC(=O)NC5=O)c(F)c4)CC3)c(C#N)c2)cc1
C40H45ClFN5O6
746.280000
GXBOVPUBAMPDLJ-UMSFTDKQSA-N - -
MolGlueDB
MolGlueDB:MGDB1563
Local ready
Direct docking supported
E3L065939
LIG000509
63
COc1ccc2cccc(CC(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)c2c1
C26H23N3O5
457.486000
GXJUZUWLUQFMSB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB737
Local ready
Direct docking supported
E3L065940
LIG000510
19
O=C1CCC(N2C(=O)c3cccc(N4CCCCC4)c3C2=O)C(=O)N1
C18H19N3O4
341.367000
GXLMQGTZIWFZLM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1029
Local ready
Direct docking supported
E3L065941
LIG000511
BI-3802
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@H](C)C[C@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C24H29ClN6O3
484.988000
GXTJETQFYHZHNB-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, MolGlueDB
BindingDB:BDBM50545525; MolGlueDB:MGDB1290
Local ready
Direct docking supported
E3L065943
LIG000513
NE-006
Nc1ccc(F)c2c1CN(C1CCC(=O)NC1=O)C2=O
C13H12FN3O3
277.255000
GXZGESNBBBAQLB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB804
Local ready
Direct docking supported
E3L065944
LIG000514
EM12-SO2Tr2
O=C1CCC(N2Cc3ccc(S(=O)(=O)n4cncn4)cc3C2=O)C(=O)N1
C15H13N5O5S
375.366000
GYSXFSKJGFNFSL-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630770; MolGlueDB:MGDB1254
Local ready
Direct docking supported
E3L065945
LIG000515
33
CC[C@H](CO)Nc1nc(NCc2ccc(Br)cc2)c2ncn(C(C)C)c2n1
C19H25BrN6O
433.354000
GYWZJUZWAKHTLQ-OAHLLOKOSA-N - -
MolGlueDB
MolGlueDB:MGDB191
Local ready
Direct docking supported
E3L065946
LIG000516
Z5000147208
CCn1nccc1S(=O)(=O)Nc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C18H19N5O5S
417.447000
GZAZQMXYUFCTCW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB485
Local ready
Direct docking supported
E3L065947
LIG000517
24
O=C1CCC(N2C(=O)c3cccc(N4CC5(COC5)C4)c3C2=O)C(=O)N1
C18H17N3O5
355.350000
GZJHXBSTBIPXEV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1025
Local ready
Direct docking supported
E3L065948
LIG000518
DS54
Cn1cc(-n2cnc3c(NCc4nc5cc(O)ccc5[nH]4)nc(N4CCOCC4)nc32)cn1
C21H22N10O2
446.475000
GZMVERBWGFNOMK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1611
Local ready
Direct docking supported