E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065970
LIG000540
17
Nc1cccc2c1ncn2C1CCC(=O)NC1=O
C12H12N4O2
244.254000
HJIALHKCRPBMOA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB829
Local ready
Direct docking supported
E3L065971
LIG000541
22o
CC(C)(C)c1cccc(NC(=O)NCc2ccc3nnn(C4CCC(=O)NC4=O)c(=O)c3c2)c1
C24H26N6O4
462.510000
HJPYOJYWYVMTJO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB82
Local ready
Direct docking supported
E3L065972
LIG000542
ZXH-2-093
O=C1CCC(N2Cc3c(Nc4ccnc(Nc5ccc6c(c5)Cc5ccccc5-6)n4)cccc3C2=O)C(=O)N1
C30H24N6O3
516.561000
HJQUHGOGBFRLIP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1141
Local ready
Direct docking supported
E3L065973
LIG000543
QXG-131-6
Cc1c(C(=O)Nc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)nc2ccccn12
C22H19N5O4
417.425000
HJVNRBFXIXENJT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB235
Local ready
Direct docking supported
E3L065975
LIG000545
31
CC[C@H](CO)Nc1nc(NCc2ccc(-c3cn[nH]c3)cc2)c2ncn(C(C)C)c2n1
C22H28N8O
420.521000
HKKCGSDYVXEOHM-GOSISDBHSA-N - -
MolGlueDB
MolGlueDB:MGDB213
Local ready
Direct docking supported
E3L065976
LIG000546
SJ0040
Cc1cccc(C(=O)Nc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)c1
C21H19N3O4
377.400000
HKQXTORGXDGFIQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB302
Local ready
Direct docking supported
E3L065978
LIG000548
FL6
O=C1CCC(c2cccc(OS(=O)(=O)F)c2)C(=O)N1
C11H10FNO5S
287.268000
HKTFEELTLCEILT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB926
Local ready
Direct docking supported
E3L065979
LIG000549
ZZ7-16-020
CC(C)S(=O)(=O)c1ccccc1Nc1nc(NC2CN(C(=O)c3ccccc3)C2)ncc1Cl
C23H24ClN5O3S
485.997000
HKXWKJUWASESPO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB179
Local ready
Direct docking supported
E3L065980
LIG000550
R9
O=C1CCC(NC(=O)c2cccc3cc[nH]c23)C(=O)N1
C14H13N3O3
271.276000
HLIFKZPFEAXHSQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1389
Local ready
Direct docking supported
E3L065981
LIG000551
8
CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccc(O)cn3)cc2)c2ncn(C(C)C)c2n1
C24H29N7O2
447.543000
HMFHGGLGKHMQPW-GOSISDBHSA-N - -
MolGlueDB
MolGlueDB:MGDB218
Local ready
Direct docking supported
E3L065982
LIG000552
9r
COc1ccc(-c2ccc3[nH]c(=O)c4nnn(-c5ccc(N6CCN(C(=O)/C=C/C(=O)c7ccc(Br)cc7)CC6)c(C(F)(F)F)c5)c4c3c2)cn1
C36H27BrF3N7O4
758.555000
HMMVSBOUNVPJOS-ACCUITESSA-N - -
MolGlueDB
MolGlueDB:MGDB667
Local ready
Direct docking supported
E3L065983
LIG000553
LIG000553
O=C1CCC(N2Cc3ccc(F)cc3C2=O)C(=O)N1
C13H11FN2O3
262.240000
HNAQSGYWVZTYEF-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:169
Local ready
Direct docking supported
E3L065984
LIG000554
LL-K12-10
CCn1cnc2c(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)nc(N3CCN(C(=O)c4ccncc4)CC3)nc21
C25H24Cl2N10O
551.442000
HNNHEQRZNFLUHK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB468
Local ready
Direct docking supported
E3L065985
LIG000555
21b
O=C1CCC(N2Cc3cc(C4=C[C@@]4(COOCC(Cl)(Cl)Cl)c4ccc(Br)cc4)ccc3C2=O)C(=O)N1
C25H20BrCl3N2O5
614.707000
HNNUQHAIWLOKQD-PIFIWZBESA-N - -
MolGlueDB
MolGlueDB:MGDB1165
Local ready
Direct docking supported
E3L065986
LIG000556
MRT-2359
O=C1CCC(N2Cc3ccc(COC(=O)Nc4cc(OC(F)(F)F)ccc4F)cc3C2=O)C(=O)N1
C22H17F4N3O6
495.385000
HNTGMIGBGVFOBT-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM654045; MolGlueDB:MGDB1241
Local ready
Direct docking supported
E3L065988
LIG000558
6b
O=C1CCC(NC(=O)c2cc(F)c(F)c(F)c2F)C(=O)N1
C12H8F4N2O3
304.199000
HOAHVHODYFOOBF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630589; MolGlueDB:MGDB902
Local ready
Direct docking supported
E3L065989
LIG000559
DS28(S-CR8)
CC[C@@H](CO)Nc1nc(NCc2ccc(-c3ccccn3)cc2)c2ncn(C(C)C)c2n1
C24H29N7O
431.544000
HOCBJBNQIQQQGT-IBGZPJMESA-N - -
MolGlueDB
MolGlueDB:MGDB1600
Local ready
Direct docking supported
E3L065990
LIG000560
CR8
CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccccn3)cc2)c2ncn(C(C)C)c2n1
C24H29N7O
431.544000
HOCBJBNQIQQQGT-LJQANCHMSA-N P51948 Cyclin-H
BindingDB, MolGlueDB
BindingDB:BDBM50154937; MolGlueDB:MGDB204
Local ready
Direct docking supported
E3L065993
LIG000563
9c
C=CC(=O)N1CCN(c2ccc(-n3nnc4c(=O)[nH]c5ccc(-c6ccc(OC)nc6)cc5c43)cc2C(F)(F)F)CC1
C29H24F3N7O3
575.551000
HPGCMTZBARIUGP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB32
Local ready
Direct docking supported
E3L065994
LIG000564
11b
Nc1ccc(C(=O)NC2CCC(=O)NC2=O)c(C(F)(F)F)c1
C13H12F3N3O3
315.251000
HPKPRXOHNCNKLQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630597; MolGlueDB:MGDB797
Local ready
Direct docking supported