E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066659
LIG001229
Bufalin
C[C@]12CC[C@H](O)C[C@H]1CC[C@@H]1[C@@H]2CC[C@]2(C)[C@H](c3ccc(=O)oc3)CC[C@@]12O
C24H34O4
386.532000
QEEBRPGZBVVINN-ONGIWDLKSA-N - -
MolGlueDB
MolGlueDB:MGDB20
Related BindingDB:BDBM50584761
Local ready
Direct docking supported
E3L066660
LIG001230
SJ3149
O=C1CCC(N2Cc3cc(NC4=NOC5C=CC=CC45)ccc3C2=O)C(=O)N1
C20H18N4O4
378.388000
QEPOWTIIZZQQBU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1082
Local ready
Direct docking supported
E3L066661
LIG001231
LIG001231
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](N)C[C@H]1C(=O)Nc1c(F)cccc1F)C(C)(C)C
C21H31F2N5O3
439.507000
QESAPZFIIYNQSO-WXRXAMBDSA-N Q13490 -
e3_ligand
e3_ligand:39
Local ready
Direct docking supported
E3L066662
LIG001232
55
O=C1CCC(N2Cc3cc(NC(=O)c4ccc5c(c4)OCO5)ccc3C2=O)C(=O)N1
C21H17N3O6
407.382000
QFCPONCMDMLLOZ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1201
Local ready
Direct docking supported
E3L066663
LIG001233
2
O=C1CCC(n2nc3ccccc3n2)C(=O)N1
C11H10N4O2
230.227000
QFGWCBAWFMYBCK-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB219
Local ready
Direct docking supported
E3L066664
LIG001234
LC-04-044
Cc1cccc(-c2ccccc2CN2CCn3c(-c4ccc5c(c4)CN([C@H]4CCC(=O)NC4=O)C5=O)cnc3C2)c1
C33H31N5O3
545.643000
QFJVYQHQPIQNAH-NDEPHWFRSA-N - -
MolGlueDB
MolGlueDB:MGDB1269
Local ready
Direct docking supported
E3L066665
LIG001235
LIG001235
O=C1CCC(N2C(=O)c3ccncc3C2=O)C(=O)N1
C12H9N3O4
259.221000
QFSZJXRBCXUCMD-UHFFFAOYSA-N Q96SW2 -
e3_ligand
e3_ligand:148
Local ready
Direct docking supported
E3L066666
LIG001236
dALK-1
Cc1cc(Nc2ncc(Cl)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC(C)C)cc1C1CCN(CCCCC#Cc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1
C47H52ClN7O7S
894.495000
QFUNFXAZNXGJTI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB281
Local ready
Direct docking supported
E3L066667
LIG001237
11
CC(=O)NCCC#Cc1cccc(N2CCC(=O)NC2=O)c1C
C17H19N3O3
313.357000
QFWGXTYWCUQWLL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB78
Local ready
Direct docking supported
E3L066668
LIG001238
4
CC(C)(c1ccc(OCC2CCN(C(=O)CCCCCCCNc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)cc1)c1ccc(OC[C@H](O)CCl)cc1
C45H55ClN4O8
815.408000
QGZDNICFRLEYLE-PQVOGGOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1535
Local ready
Direct docking supported
E3L066669
LIG001239
29
O=C1CCC(N2Cc3cc(CN4CCN(c5cccc(Oc6ccccc6)c5)C4=O)ccc3C2=O)C(=O)N1
C29H26N4O5
510.550000
QHABCTQGDAHUSA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1178
Local ready
Direct docking supported
E3L066670
LIG001240
8
Cn1nnc(-c2ccc3c(c2)[nH]c2ncnc(N[C@H]4CC[C@H](N(C)C)CC4)c23)n1
C20H25N9
391.483000
QHRKOXZUTFZMCS-HDJSIYSDSA-N - -
MolGlueDB
MolGlueDB:MGDB1416
Local ready
Direct docking supported
E3L066671
LIG001241
LIG001241
CN[C@@H](C)C(=O)N[C@H]1CN(C(N)=O)CC[C@H]2CCC(C(=O)N[C@@H]3CCCc4ccccc43)N2C1=O
C25H36N6O4
484.601000
QHYITBCWKKKNJG-FINUNZQWSA-N - -
e3_ligand
e3_ligand:71
Local ready
Direct docking supported
E3L066672
LIG001242
Z5112142520
CNC(=O)N1CC(NC(=O)Nc2ccc3c(C4CCC(=O)NC4=O)nn(C)c3c2)C1
C19H23N7O4
413.438000
QIGMYZVINDLMFJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB597
Local ready
Direct docking supported
E3L066673
LIG001243
analogue 8
CC(C)(C(=O)NCc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2)c1ccccc1
C24H25N3O4
419.481000
QIQIAQCQBUDKRM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB79
Local ready
Direct docking supported
E3L066674
LIG001244
62
COc1ccc2c(CC(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cccc2c1
C26H23N3O5
457.486000
QJBNEXUSTCCRIM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB721
Local ready
Direct docking supported
E3L066675
LIG001245
19a
O=C1CCC(N2Cc3c(cccc3C3=C[C@]3(C(=O)OCC(Cl)(Cl)Cl)c3ccc(Br)cc3)C2=O)C(=O)N1
C25H18BrCl3N2O5
612.691000
QJPRNMFEJIIKQS-WIIYFNMSSA-N - -
MolGlueDB
MolGlueDB:MGDB1088
Local ready
Direct docking supported
E3L066676
LIG001246
ZXH-1-126
CC(=O)c1ccc(-c2nccc(NCC(=O)Nc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)n2)cc1
C27H24N6O5
512.526000
QJVGYLGRXWPTER-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585784; MolGlueDB:MGDB47
Local ready
Direct docking supported
E3L066677
LIG001247
cmpd 15
O=C1CCC(N2C(=O)c3cccc(Nc4ccnc(NS(=O)(=O)c5ccc(Cl)cc5)n4)c3C2=O)C(=O)N1
C23H17ClN6O6S
540.945000
QKGRRALQXCHRCY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1033
Local ready
Direct docking supported
E3L066678
LIG001248
5
CC1CC(O)CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C1
C23H31ClN6O3
474.993000
QKIKTQLOBNLUOX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB424
Related BindingDB:BDBM50606285; Related BindingDB:BDBM699656
Local ready
Direct docking supported