E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066721
LIG001291
AN5602
Cc1ccc2nc(C)c(C(=O)N/N=C/c3cccnc3)cc2c1
C18H16N4O
304.353000
QZXAQKBCLSVYCJ-RGVLZGJSSA-N - -
MolGlueDB
MolGlueDB:MGDB372
Local ready
Direct docking supported
E3L066722
LIG001292
13
CC(C)(c1ccc(OCC2CCN(C(=O)CCCCCCOc3ccc4c(c3)C(=O)N(C3CCC(=O)NC3=O)C4=O)CC2)cc1)c1ccc(OC[C@H](O)CCl)cc1
C44H52ClN3O9
802.365000
RADMJLLCVISLHZ-NMKCAVOUSA-N - -
MolGlueDB
MolGlueDB:MGDB1544
Local ready
Direct docking supported
E3L066723
LIG001293
LIG001293
O=C1CCN(Cc2ccccc2)C(=O)N1
C11H12N2O2
204.229000
RAGSBUDIXSABRI-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, e3_ligand
BindingDB:BDBM581734; e3_ligand:159
Local ready
Direct docking supported
E3L066724
LIG001294
10
O=C1CCC(n2cc(-c3cscc3OCC3CCCCC3)nn2)C(=O)N1
C18H22N4O3S
374.466000
RBXFEJBRBRJAJN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1303
Local ready
Direct docking supported
E3L066725
LIG001295
HQ005
Cc1cnc(NC(=O)Cc2csc(Nc3cccc(CO)n3)n2)s1
C15H15N5O2S2
361.452000
RCCDIUZAPKBQLV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB397
Local ready
Direct docking supported
E3L066726
LIG001296
27
CC(C)(C)OC(=O)N1CCN(c2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)CC1
C22H26N4O6
442.472000
RCYJUXUDJQXBGQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB111
Local ready
Direct docking supported
E3L066727
LIG001297
Z5000147289
N#Cc1sc2ccccc2c1S(=O)(=O)Nc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C22H16N4O5S2
480.527000
RDCPKDRCKZJZEG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB759
Local ready
Direct docking supported
E3L066728
LIG001298
6e
COc1cc2onc(C)c2cc1NS(=O)(=O)c1cc(Br)ccc1OCC(=O)NCCCCCCNC(=O)COc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C38H39BrN6O12S
883.731000
RDTNUMAXRGUTHB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB726
Local ready
Direct docking supported
E3L066729
LIG001299
74
COc1cccc2c1C=C(C(=O)Nc1ccc3c(c1)CN(C1CCC(=O)NC1=O)C3=O)CO2
C24H21N3O6
447.447000
RFENVQIDXQQDHS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB627
Local ready
Direct docking supported
E3L066730
LIG001300
27
Cc1ccc(N2CCCN(Cc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2=O)cc1Cl
C25H25ClN4O4
480.952000
RGAAYOOQOATZEL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB286
Local ready
Direct docking supported
E3L066731
LIG001301
ALV-07-037-01
CC(=O)c1c(C)c2cnc(Nc3ccc(N4CCN(CCOCCOCCOc5cccc(CN6CCC(c7ccc8c(c7)CN(C7CCC(=O)NC7=O)C8=O)CC6)c5)CC4)cn3)nc2n(C2CCCC2)c1=O
C55H66N10O8
995.195000
RGRLZYQCVJDBHO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1526
Local ready
Direct docking supported
E3L066732
LIG001302
Z4871545631
Cc1ccc(NC2CCC(=O)NC2=O)c(Cl)c1
C12H13ClN2O2
252.701000
RHENVMWAACMFML-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB359
Local ready
Direct docking supported
E3L066733
LIG001303
75
O=C1CCC(N2C(=O)c3ccc(NC(=O)C4CCC4)cc3C2=O)C(=O)N1
C18H17N3O5
355.350000
RHHPPTURSOAPQY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB962
Local ready
Direct docking supported
E3L066734
LIG001304
80
O=C1CCC(N2C(=O)c3ccc(NC(=O)c4cnccn4)cc3C2=O)C(=O)N1
C18H13N5O5
379.332000
RHKNLWRBBYVMMD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB960
Local ready
Direct docking supported
E3L066735
LIG001305
dFKBP-1
CCC(C)(C)C(=O)C(=O)N1CCCC[C@H]1C(=O)O[C@H](CCc1ccc(OC)c(OC)c1)c1cccc(NC(=O)CCC(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)c1
C53H64N6O14
1009.123000
RIBCWKRMNKOGRN-GGJINPDOSA-N - -
MolGlueDB
MolGlueDB:MGDB429
Local ready
Direct docking supported
E3L066736
LIG001306
LIG001306
C#Cc1ccc([C@H](CC(=O)NC)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](c2cc(C)no2)C(C)C)cc1
C26H32N4O5
480.565000
RILDEXHTOOMQCV-MDAIXWLXSA-N P40337 -
e3_ligand
e3_ligand:30
Local ready
Direct docking supported
E3L066737
LIG001307
MANT-uracil
CNc1ccccc1C(O)NCCN1CCC(=O)NC1O
C14H22N4O3
294.355000
RIPWUWMUOGSPBJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1395
Local ready
Direct docking supported
E3L066738
LIG001308
9n
COc1cccc(C(=O)/C=C/C(=O)N2CCN(c3ccc(-n4nnc5c(=O)[nH]c6ccc(-c7ccc(OC)nc7)cc6c54)cc3C(F)(F)F)CC2)c1
C37H30F3N7O5
709.685000
RIQCUPAYLATODD-ACCUITESSA-N - -
MolGlueDB
MolGlueDB:MGDB708
Local ready
Direct docking supported
E3L066739
LIG001309
21
Cn1nc(N)c2nc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc(CN3CCCC3)c21
C25H27N7O3
473.537000
RIRKNMJJINDXAY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1512
Local ready
Direct docking supported
E3L066740
LIG001310
2
Cn1cc(-c2ccc3c(c2)[nH]c2nc(Cc4ccccc4)nc(N[C@H]4CC[C@H](N)CC4)c23)cn1
C27H29N7
451.578000
RKABSGYFBJREIG-MEMLXQNLSA-N - -
MolGlueDB
MolGlueDB:MGDB1410
Local ready
Direct docking supported