E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066741
LIG001311
SJ6986
O=C1CCC(N2C(=O)c3ccc(NS(=O)(=O)c4ccccc4OC(F)(F)F)cc3C2=O)C(=O)N1
C20H14F3N3O7S
497.407000
RKAFYSIKAVFVPS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM669519; MolGlueDB:MGDB1014
Local ready
Direct docking supported
E3L066742
LIG001312
LIG001312
Cc1nc2ccccc2c(=O)n1C1CCC(=O)NC1=O
C14H13N3O3
271.276000
RKAGXGJVJCKBPG-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, e3_ligand
BindingDB:BDBM511644; e3_ligand:152
Local ready
Direct docking supported
E3L066743
LIG001313
7
CC(C)(O)c1cc2nn(CCCCCNCCCNc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)cc2cc1NC(=O)c1cccc(C(F)(F)F)n1
C38H41F3N8O6
762.790000
RKDBBXGRXIYXMB-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50639835; MolGlueDB:MGDB127
Local ready
Direct docking supported
E3L066744
LIG001314
34e
CC(NC(=O)Nc1cccc(-c2ccccc2)c1)c1ccc2nnn(C3CCC(=O)NC3=O)c(=O)c2c1
C27H24N6O4
496.527000
RKJREIMDGKHZEZ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB184
Local ready
Direct docking supported
E3L066745
LIG001315
LL-K12-4
CCn1cnc2c(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)nc(N3CCN(C(C)=O)CC3)nc21
C21H23Cl2N9O
488.383000
RKNNPLKDFGDCAJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB472
Local ready
Direct docking supported
E3L066746
LIG001316
QXG-1323
O=C1CCC(N2Cc3cc(NC(=O)c4cnc5ccccc5n4)ccc3C2=O)C(=O)N1
C22H17N5O4
415.409000
RKVSIVQGWAFNJW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1062
Local ready
Direct docking supported
E3L066748
LIG001318
14w
O=C1CCC(CSc2ccccc2C(=O)O)C(=O)N1
C13H13NO4S
279.317000
RLSRLYVKQYQEJV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB941
Local ready
Direct docking supported
E3L066749
LIG001319
CM-2
O=C1CCC(N2Cc3c(OCCCC(=O)N4CCCc5ccccc54)cccc3C2=O)C(=O)N1
C26H27N3O5
461.518000
RLTDCECVFNMASN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1453
Local ready
Direct docking supported
E3L066750
LIG001320
53
O=C1CCC(N2C(=O)c3cccc(-c4cc5ccccc5s4)c3C2=O)C(=O)N1
C21H14N2O4S
390.420000
RLYZXAUKZSXFDV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1021
Local ready
Direct docking supported
E3L066751
LIG001321
18
O=C1CCC(N2Cc3cc(CNC(=O)Nc4ccc(Cl)cc4Cl)ccc3C2=O)C(=O)N1
C21H18Cl2N4O4
461.305000
RMCSISWOQSSDHG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1181
Local ready
Direct docking supported
E3L066752
LIG001322
37
CCOc1ccc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2c1
C26H23N3O5
457.486000
RMDIWTMEVMFWCD-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB500
Local ready
Direct docking supported
E3L066753
LIG001323
5O
Cn1c(=O)n(C2CCC(=O)NC2=O)c2cccc(Br)c21
C13H12BrN3O3
338.161000
RMODNRAIBFTCEC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB543
Local ready
Direct docking supported
E3L066754
LIG001324
D3
O=c1c(-c2ccccn2)cn(Cc2ccccc2)c(=O)n1Cc1ccccc1
C23H19N3O2
369.424000
RMULPOPAACYLFW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB891
Local ready
Direct docking supported
E3L066755
LIG001325
T11
O=C(COCCOCCOCc1ccccc1)NCc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C27H29N3O8
523.542000
RNBQLFGIDLXHCT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB875
Local ready
Direct docking supported
E3L066756
LIG001326
QXG-131-1
COc1ccn2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc2c1
C22H19N5O5
433.424000
RNEWLPVIZSSIKR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB741
Local ready
Direct docking supported
E3L066758
LIG001328
ZXH-2-133
COc1ccccc1C1N=C(Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)c2nc[nH]c2N1
C25H23N7O4
485.504000
RNLLWLRACTUXRL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB715
Local ready
Direct docking supported
E3L066759
LIG001329
TX-16
CN1Cc2cc3c(cc2C1)C(=O)N(C1CCC(=O)NC1=O)C3=O
C16H15N3O4
313.313000
RNXFHBLKGAWWBL-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, e3_ligand
BindingDB:BDBM50628761; e3_ligand:126
Local ready
Direct docking supported
E3L066760
LIG001330
DS09
CC[C@H](CO)Nc1nc(NCCCCc2ccccc2)c2ncn(C(C)C)c2n1
C22H32N6O
396.539000
ROGNKYQZCSTSTF-GOSISDBHSA-N - -
MolGlueDB
MolGlueDB:MGDB1566
Local ready
Direct docking supported
E3L066761
LIG001331
Z5000146291
O=C1CCC(N2Cc3cc(NS(=O)(=O)c4cccc5ccoc45)ccc3C2=O)C(=O)N1
C21H17N3O6S
439.449000
ROGPPQPCAUZVKQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1234
Local ready
Direct docking supported
E3L066762
LIG001332
SAB355
CC(=O)c1c(C)c2cnc(Nc3ccc(N4CCN(CC(=O)NCCOCCOCCOCC(=O)Nc5cccc6c5CN(C5CCC(=O)NC5=O)C6=O)CC4)cn3)nc2n(C2CCCC2)c1=O
C47H57N11O10
936.040000
ROGURJAGCVFXED-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB40
Local ready
Direct docking supported