E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L007461
BDB007461
BDBM170395
CN1CCC(NC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C29H35Cl2FN4O2
561.529000
QXMKRYIVLYFHPN-BGLPIVGWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM170395; PubChem:CID52937949
Local ready
Direct docking supported
E3L007462
BDB007462
BDBM170396
CN1CCC(CNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C30H37Cl2FN4O2
575.556000
UXVGENTYNSJSOX-HVHHDALESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170396
Local ready
Direct docking supported
E3L007463
BDB007463
BDBM170398
CC(C)(C)C[C@H]1N[C@@H](C(=O)N[C@H]2CC[C@@H](N)C2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C28H33Cl2FN4O2
547.502000
HQXPDPHYOWFJIB-LGRXXBSZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170398
Local ready
Direct docking supported
E3L007464
BDB007464
BDBM170399
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC2CCN(CCC(F)(F)F)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C31H36Cl2F4N4O2
643.553000
NRNAHPIUCOHTJT-IUXWYWOJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170399
Local ready
Direct docking supported
E3L007465
BDB007465
BDBM170400
CN1CC[C@@H](NC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)[C@@H](F)C1
C29H34Cl2F2N4O2
579.519000
FNPAWPXECREYQA-HYHVHEOASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170400
Local ready
Direct docking supported
E3L007466
BDB007466
BDBM170401
CC(C)(C)C[C@H]1N[C@@H](C(=O)N[C@@H]2CCN(CCF)C[C@@H]2F)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C30H35Cl2F3N4O2
611.536000
UUORNGBCVZGLIB-ZXHRZLIWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170401
Local ready
Direct docking supported
E3L007467
BDB007467
BDBM170404
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC2CN(CC(F)F)C2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C28H31Cl2F3N4O2
583.482000
JLEYVVUUBNDJRZ-IAZDFEAMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM170404
Local ready
Direct docking supported
E3L007468
BDB007468
BDBM171821
O=c1c(-c2cccnc2)c[nH]n1-c1ccccn1
C13H10N4O
238.250000
ZAHLNBNEUSTJDY-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171821; PubChem:CID59186947
Local ready
Direct docking supported
E3L007469
BDB007469
BDBM171822
O=c1c(-c2cccnc2)c[nH]n1-c1ccc(CO)cn1
C14H12N4O2
268.276000
LADVMLZJFNXBAO-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171822; PubChem:CID59186965
Local ready
Direct docking supported
E3L007470
BDB007470
BDBM171823
Cc1ncccc1-c1c[nH]n(-c2ccccn2)c1=O
C14H12N4O
252.277000
MFHPFKHGHQQNFQ-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171823; PubChem:CID59186952
Local ready
Direct docking supported
E3L007471
BDB007471
BDBM171824
Cc1ccnc(-n2[nH]cc(-c3ccc(C#N)nc3)c2=O)c1
C15H11N5O
277.287000
YXBXEIIRBJVTBQ-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171824; PubChem:CID11947808
Local ready
Direct docking supported
E3L007472
BDB007472
BDBM171825
NCc1ccnc(-n2[nH]cc(-c3cccnc3)c2=O)c1
C14H13N5O
267.292000
ICCGIBTWBHPFQU-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171825; PubChem:CID59186942
Local ready
Direct docking supported
E3L007473
BDB007473
BDBM171826
O=c1c(-c2cccnc2)c[nH]n1-c1cc(CO)ccn1
C14H12N4O2
268.276000
DVVILILDYXVNKH-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171826; PubChem:CID59186936
Local ready
Direct docking supported
E3L007474
BDB007474
BDBM171827
O=C(Cc1ccccc1)NCc1ccnc(-n2[nH]cc(-c3cccnc3)c2=O)c1
C22H19N5O2
385.427000
YSIOFIYWFXTLFW-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171827; PubChem:CID59186986
Local ready
Direct docking supported
E3L007475
BDB007475
BDBM171828
CC(=O)NCc1ccnc(-n2[nH]cc(-c3cccnc3)c2=O)c1
C16H15N5O2
309.329000
QBOIPJIJRFKSFL-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171828; PubChem:CID59186933
Local ready
Direct docking supported
E3L007476
BDB007476
BDBM171829
O=C(NCc1ccnc(-n2[nH]cc(-c3cccnc3)c2=O)c1)c1ccccc1
C21H17N5O2
371.400000
LXJDQCAKLRQFTC-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171829; PubChem:CID59186984
Local ready
Direct docking supported
E3L007477
BDB007477
BDBM171830
O=C(CCn1cc(Cl)cn1)NCc1ccnc(-n2[nH]cc(-c3cccnc3)c2=O)c1
C20H18ClN7O2
423.864000
DMTRRNGKQDUYPV-UHFFFAOYSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM171830; PubChem:CID59186972
Local ready
Direct docking supported
E3L007478
BDB007478
Tazemetostat
CCN(c1cc(-c2ccc(CN3CCOCC3)cc2)cc(C(=O)NCc2c(C)cc(C)[nH]c2=O)c1C)C1CCOCC1
C34H44N4O4
572.750000
NSQSAUGJQHDYNO-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM172038; PubChem:CID66558664
Local ready
Direct docking supported
E3L007479
BDB007479
Plx-5622
COc1ncc(F)cc1CNc1ccc(Cc2c[nH]c3ncc(C)cc23)c(F)n1
C21H19F2N5O
395.413000
NSMOZFXKTHCPTQ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM174948; PubChem:CID52936034
Local ready
Direct docking supported
E3L007480
BDB007480
BDBM176815
O=C(NCC(O)CN1CCc2ccccc2C1)c1cccc(-c2ccccn2)c1
C24H25N3O2
387.483000
IQOXVADYZAROMQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM176815; PubChem:CID76902883
Local ready
Direct docking supported