E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008721
BDB008721
BDBM213317
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(C(F)F)cc(C(F)F)n3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H23F7N6O2
596.507000
JSVWFDJUTFILPU-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213317; PubChem:CID77846871
Local ready
Direct docking supported
E3L008722
BDB008722
BDBM213323
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(C4OCCO4)cn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H27F3N6O4
568.556000
MWNHHTUADJJNBK-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213323; PubChem:CID77846956
Local ready
Direct docking supported
E3L008723
BDB008723
BDBM213352
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(OC(F)F)cn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H23F5N6O3
562.499000
DDQIFTQFWYJKKR-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213352; PubChem:CID77846957
Local ready
Direct docking supported
E3L008724
BDB008724
BDBM213354
COc1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C26H25F3N6O3
526.519000
ITRHKUPFILOEQW-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213354; PubChem:CID77846958
Local ready
Direct docking supported
E3L008725
BDB008725
BDBM213358
CCCc1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C28H29F3N6O2
538.574000
VFDDIWFTWCMGIS-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213358; PubChem:CID77846959
Local ready
Direct docking supported
E3L008726
BDB008726
BDBM213359
CCc1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C27H27F3N6O2
524.547000
KLIDEBVNJPATCD-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213359; PubChem:CID77846960
Local ready
Direct docking supported
E3L008727
BDB008727
BDBM213361
CC(C)c1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)n1
C28H29F3N6O2
538.574000
QNQAYWUSHPQEOB-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213361; PubChem:CID77847040
Local ready
Direct docking supported
E3L008728
BDB008728
BDBM213362
CC(C)c1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(OC(F)(F)F)c(F)c2)c1
C28H28F4N6O3
572.563000
LNMKUQHCQKKGKH-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM213362; PubChem:CID77847041
Local ready
Direct docking supported
E3L008729
BDB008729
BDBM213366
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3c(C)nn(C)c23)cc(C#Cc2ccc3c(cnn3C)c2)n1
C26H25N9O
479.548000
LMNLBOFXCQQZHK-MRXNPFEDSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213366; PubChem:CID124201767
Local ready
Direct docking supported
E3L008730
BDB008730
BDBM213367
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3c(C)nn(C)c23)cc(C#Cc2ccc3c(C)nccc3c2)n1
C28H26N8O
490.571000
BFJRQYOXKDJOAD-GOSISDBHSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM213367; PubChem:CID124201768
Local ready
Direct docking supported
E3L008731
BDB008731
BDBM213368
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3c(C)nn(C)c23)cc(C#Cc2cc(C)nc3c(F)cccc23)n1
C28H25FN8O
508.561000
HVHRROJQIZQHJX-QGZVFWFLSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM213368; PubChem:CID124201769
Local ready
Direct docking supported
E3L008732
BDB008732
BDBM213369
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3c(C)nn(C)c23)cc(C#Cc2ccn3c(C)ncc3c2)n1
C26H25N9O
479.548000
ZHJDTJNSIZPBCQ-MRXNPFEDSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213369; PubChem:CID124201770
Local ready
Direct docking supported
E3L008733
BDB008733
BDBM213370
CN[C@H](C)C(=O)Nc1cc(-c2c(OC)ccc3nc(C)ccc23)cc(C#Cc2ccccc2)n1
C28H26N4O2
450.542000
KRWDYMJZMRNHCX-LJQANCHMSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM213370; PubChem:CID124201771
Local ready
Direct docking supported
E3L008734
BDB008734
BDBM213371
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3cnn(C)c23)cc(C#Cc2ccc3c(C)nccc3c2)n1
C27H24N8O
476.544000
AFNPHJOFGDZGGL-QGZVFWFLSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM213371; PubChem:CID124201772
Local ready
Direct docking supported
E3L008735
BDB008735
BDBM213372
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3cnn(C)c23)cc(C#Cc2ccccc2)n1
C23H21N7O
411.469000
YBZIUCCRKJMKFE-OAHLLOKOSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213372; PubChem:CID124201773
Local ready
Direct docking supported
E3L008736
BDB008736
BDBM213373
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3cnn(C)c23)cc(C#Cc2ccc3c(ccc(=O)n3C)c2)n1
C27H24N8O2
492.543000
NICRIMMNOCVZDK-MRXNPFEDSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213373; PubChem:CID124201774
Local ready
Direct docking supported
E3L008737
BDB008737
BDBM213374
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3cnn(C)c23)cc(C#Cc2ccc(-n3cnc(C)c3)cc2)n1
C27H25N9O
491.559000
MGNFGDSTJAIDEC-GOSISDBHSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213374; PubChem:CID124201775
Local ready
Direct docking supported
E3L008738
BDB008738
BDBM213375
CN[C@H](C)C(=O)Nc1cc(-c2ncnc3oc(C)c(C)c23)cc(C#Cc2ccccc2)n1
C25H23N5O2
425.492000
KKAHHENNYGUCJF-MRXNPFEDSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213375; PubChem:CID124201776
Local ready
Direct docking supported
E3L008739
BDB008739
BDBM213376
CN[C@H](C)C(=O)Nc1cc(-c2cccc3nc(C)c(C)n23)cc(C#Cc2ccc3c(C)nccc3c2)n1
C30H28N6O
488.595000
YSWMEDPQKFWVOU-HXUWFJFHSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM213376; PubChem:CID124201777
Local ready
Direct docking supported
E3L008740
BDB008740
BDBM213377
CN[C@H](C)C(=O)Nc1cc(-c2cccc3cnn(C)c23)cc(C#Cc2ccc3c(c2)CC(=O)N3C)n1
C28H26N6O2
478.556000
VIAJWVFURJEYIO-QGZVFWFLSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM213377; PubChem:CID124201778
Local ready
Direct docking supported