E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010461
BDB010461
BDBM223771
C[C@@H](Nc1nc(CO)nc2nc(N3CCOC[C@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H33F3N6O2
566.628000
OOVPUEWKLXVJIU-DVECYGJZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM223771; PubChem:CID90325104
Local ready
Direct docking supported
E3L010462
BDB010462
BDBM223772
CC(C)c1ccnc(-c2nc3nc(CO)nc(N[C@H](C)C4CCC4)c3n2C[C@H]2CC[C@H](C)CC2)c1
C28H40N6O
476.669000
YMKOTNFGKLOUIP-VAMGGRTRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223772
Local ready
Direct docking supported
E3L010463
BDB010463
BDBM223773
C[C@@H](Nc1nc(NCCO)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C31H45N7O2
547.748000
LNSPGHSHFLQZHF-FCBCXNLDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223773
Local ready
Direct docking supported
E3L010464
BDB010464
BDBM223774
C[C@@H](Nc1nc(N2CCC[C@H]2C(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C34H47N7O3
601.796000
RLQICMIEIRSMIZ-WSCKULIASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223774
Local ready
Direct docking supported
E3L010465
BDB010465
BDBM223775
CNc1nc(N[C@H](C)C2CCC2)c2c(n1)nc(N1CCOC[C@H]1c1ccccc1)n2C[C@H]1CC[C@H](C)CC1
C30H43N7O
517.722000
NCYCMEAXMFMBJM-XAISMOLKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223775
Local ready
Direct docking supported
E3L010466
BDB010466
BDBM223776
C[C@@H](Nc1nc(N2CCC[C@@H]2C(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C34H47N7O3
601.796000
RLQICMIEIRSMIZ-FXECQFNTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223776
Local ready
Direct docking supported
E3L010467
BDB010467
BDBM223777
C[C@@H](Nc1nc(NC(C)(C)C(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C33H47N7O3
589.785000
RWYMWEVVXBKHEJ-FCBCXNLDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223777
Local ready
Direct docking supported
E3L010468
BDB010468
BDBM223983
C[C@@H](Nc1nc(NCC(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C31H43N7O3
561.731000
OKHBNLFQXUKICA-XAISMOLKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM223983
Local ready
Direct docking supported
E3L010469
BDB010469
BDBM223984
COc1ccccc1CN1C[C@H](c2cn(C)c3ccccc23)[C@@H](N(C)C)C1
C23H29N3O
363.505000
CXQQECCQTKSQKN-IRLDBZIGSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM223984; PubChem:CID124037093
Local ready
Direct docking supported
E3L010470
BDB010470
BDBM223985
Cc1cccc(F)c1CN1C[C@H](c2cn(C)c3ccccc23)[C@@H](N(C)C)C1
C23H28FN3
365.496000
MJNFUMWCOKCILM-OFNKIYASSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM223985; PubChem:CID126962003
Local ready
Direct docking supported
E3L010471
BDB010471
BDBM223986
CN(C)[C@H]1CN([C@H]2CCc3cccc(F)c32)C[C@@H]1c1cn(C)c2ccccc12
C24H28FN3
377.507000
XAWMNFFOVCNWGF-OIBXWCBGSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM223986; PubChem:CID123132216
Local ready
Direct docking supported
E3L010472
BDB010472
BDBM223987
CN(C)[C@H]1CN(C2CCc3cccc(F)c32)C[C@@H]1c1ccc(N2CCN(S(C)(=O)=O)CC2)cc1
C26H35FN4O2S
486.657000
REVJNSVNICWODC-KIDMSAQOSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM223987; PubChem:CID123132213
Local ready
Direct docking supported
E3L010473
BDB010473
A-395N
CN(C)[C@@H]1CN(Cc2ccccc2)C[C@H]1c1ccc(N2CCN(S(C)(=O)=O)CC2)cc1
C24H34N4O2S
442.629000
VEABDKBNQNHHCB-BJKOFHAPSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM223989; PubChem:CID123132222
Local ready
Direct docking supported
E3L010474
BDB010474
BDBM224012
O=C(NCCc1nccs1)c1cnc2c(S)cccc2c1
C15H13N3OS2
315.423000
MYNGHZGMRXNEEH-UHFFFAOYSA-N O95630 STAM-binding protein
BindingDB, PubChem
BindingDB:BDBM224012; PubChem:CID124081114
Local ready
Direct docking supported
E3L010475
BDB010475
BDBM224034
C[C@@H](Nc1nc(N2CCC[C@]2(C)C(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C35H49N7O3
615.823000
WNIBMAXGDSAJLG-NRWAZYHSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224034
Local ready
Direct docking supported
E3L010476
BDB010476
BDBM224035
C[C@@H](Nc1nc(N(C)CC(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C32H45N7O3
575.758000
CCUZMHJLHJDCDO-FCBCXNLDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224035
Local ready
Direct docking supported
E3L010477
BDB010477
BDBM224036
C[C@@H](Nc1nc(N2CCC(C(=O)O)C2)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C34H47N7O3
601.796000
WDBSWWOZCDLABO-FYYRUIDDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224036
Local ready
Direct docking supported
E3L010478
BDB010478
BDBM224037
CSC1(C(=O)O)CCN(c2nc(N[C@H](C)C3CCC3)c3c(n2)nc(N2CCOC[C@H]2c2ccccc2)n3C[C@H]2CC[C@H](C)CC2)C1
C35H49N7O3S
647.890000
XEWHEMWKQFHALJ-RAHVYMLLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224037
Local ready
Direct docking supported
E3L010479
BDB010479
BDBM224038
C[C@@H](Nc1nc(N2CC(C(=O)O)C(C)(C)C2)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C36H51N7O3
629.850000
DCPXBYIIAIBMNP-XUZSMEQTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224038
Local ready
Direct docking supported
E3L010480
BDB010480
BDBM224039
C[C@@H](Nc1nc(S(C)(=O)=O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(C[C@H]3CC[C@H](C)CC3)c12)C1CCC1
C30H42N6O3S
566.772000
LIKFDTZPTBZJAW-XAISMOLKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM224039
Local ready
Direct docking supported