E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010921
BDB010921
US20260008770, Example 9
CC1CC(c2cccc(-n3nc(C(F)(F)F)c4ccc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C30H33F3N6O
550.629000
SWFDTNSXPKMCIN-QORSJFMISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226986; PubChem:CID178290348
Local ready
Direct docking supported
E3L010922
BDB010922
US20260008770, Example 10
CC1CC(c2cccc(-n3ncc4c(C(F)(F)F)cc(CN5CCO[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C29H31F3N6O2
552.601000
NNLZVZMXKOAIDH-WXYVZSEASA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226987; PubChem:CID178290349
Local ready
Direct docking supported
E3L010923
BDB010923
US20260008770, Example 11
CC1CC(c2cccc(-c3nc4cc(CN5CCO[C@H](C)C5)cc(C(F)(F)F)c4s3)c2)(c2nncn2C)C1
C28H30F3N5OS
541.643000
ZTVATTQDHTVLEF-VPJUXMJYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226988; PubChem:CID178290350
Local ready
Direct docking supported
E3L010924
BDB010924
US20260008770, Example 12
CC1CC(c2cccc(-n3cc(C(F)(F)F)c4ccc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C31H34F3N5O
549.641000
ZARBXSIAQDSGEZ-UGBVZGCJSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226989; PubChem:CID178290351
Local ready
Direct docking supported
E3L010925
BDB010925
US20260008770, Example 13
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3cnn(-c4cccc(C5(Cc6nncn6C)COC5)c4)c(=O)c3c2)C1
C29H31F3N6O2
552.601000
QNJRIMJMJIVSOQ-IBGZPJMESA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226990; PubChem:CID178290352
Local ready
Direct docking supported
E3L010926
BDB010926
US20260008770, Example 14
CC1CC(c2cccc(-n3ncc4c(C(F)(F)F)cc(CN5CCC(F)(F)[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C30H31F5N6O
586.609000
VBPYPKUULDKYNQ-WXYVZSEASA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226991; PubChem:CID178290353
Local ready
Direct docking supported
E3L010927
BDB010927
US20260008770, Example 15
CC1CC(c2cccc(-n3ncc4c(C(F)(F)F)cc(CN5CCC(F)(F)[C@@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C30H31F5N6O
586.609000
VBPYPKUULDKYNQ-DRTUYRIGSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226992; PubChem:CID178290354
Local ready
Direct docking supported
E3L010928
BDB010928
US20260008770, Example 16
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3sc(-c4cccc(C5(Cc6nncn6C)COC5)c4)nc3c2)C1
C28H30F3N5OS
541.643000
RFRWNYSDQVZEDL-SFHVURJKSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226993; PubChem:CID178290355
Local ready
Direct docking supported
E3L010929
BDB010929
US20260008770, Example 17
CC1CC(c2cccc(-c3nc4cc(CN5CCC[C@H](C)C5)cc(C(F)(F)F)c4[nH]3)c2)(c2nncn2C)C1
C29H33F3N6
522.619000
ZRXOEGMBVWGSAQ-VURWPYGMSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226994; PubChem:CID167274477
Local ready
Direct docking supported
E3L010930
BDB010930
US20260008770, Example 18
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3cnn(-c4cccc([C@@H](c5nncn5C)C5CCC5)c4)c(=O)c3c2)C1
C30H33F3N6O
550.629000
ZINGCDNHPUPCEW-PPHZAIPVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226995; PubChem:CID178290356
Local ready
Direct docking supported
E3L010931
BDB010931
US20260008770, Example 19
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3cnn(-c4cccc([C@H](c5nncn5C)C5CCC5)c4)c(=O)c3c2)C1
C30H33F3N6O
550.629000
ZINGCDNHPUPCEW-UZTOHYMASA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226996; PubChem:CID178290357
Local ready
Direct docking supported
E3L010932
BDB010932
US20260008770, Example 20
C#CC1CCCN(Cc2cc(C(F)(F)F)c3cnn(-c4cccc(C5(c6nncn6C)CC(C)C5)c4)c(=O)c3c2)C1
C31H31F3N6O
560.624000
HTHKAMUZWUNCFC-UHFFFAOYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226997; PubChem:CID178290358
Local ready
Direct docking supported
E3L010933
BDB010933
US20260008770, Example 21
CC1=CCCN(Cc2cc(C(F)(F)F)c3cnn(-c4cccc(C5(c6nncn6C)CC(C)C5)c4)c(=O)c3c2)C1
C30H31F3N6O
548.613000
VCGUAFHRQXXNPL-UHFFFAOYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226998; PubChem:CID178290359
Local ready
Direct docking supported
E3L010934
BDB010934
US20260008770, Example 22
CC1CC(c2cccc(-n3ncc4c(C(F)(F)F)cc(CN5CCCCC5)cc4c3=O)c2)(c2nncn2C)C1
C29H31F3N6O
536.602000
JJPOYOZWRFDUCU-UHFFFAOYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM226999; PubChem:CID178290360
Local ready
Direct docking supported
E3L010935
BDB010935
US20260008770, Example 23
CC1CC(c2cccc(-n3ccc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C31H34F3N5O
549.641000
CUTZDSZQVYBLNW-UGBVZGCJSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227000; PubChem:CID178290361
Local ready
Direct docking supported
E3L010936
BDB010936
US20260008770, Example 24
CC1CC(c2cccc(NC(=O)c3cc(CN4CCC[C@H](C)C4)cc4c3OCCC4(F)F)c2)(c2nncn2C)C1
C31H37F2N5O2
549.666000
PSTSSOWGKKCETJ-UGBVZGCJSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227001; PubChem:CID178290362
Local ready
Direct docking supported
E3L010937
BDB010937
US20260008770, Example 25
CC1CC(c2cccc(NC(=O)c3cc(CN4CCC[C@H](C)C4)cc4c3OC(F)(F)O4)c2)(c2nncn2C)C1
C29H33F2N5O3
537.611000
VLSCZHBAHVBDBM-VURWPYGMSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227002; PubChem:CID178290363
Local ready
Direct docking supported
E3L010938
BDB010938
US20260008770, Example 26
C[C@H]1CCCN(Cc2cc(C(=O)Nc3cccc([C@@H](c4nncn4C)C4COC4)c3)cc(C(F)(F)F)c2)C1
C28H32F3N5O2
527.591000
MULALJFKIWSVSO-AVRWGWEMSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227003; PubChem:CID178290364
Local ready
Direct docking supported
E3L010939
BDB010939
US20260008770, Example 27
C[C@H]1CCCN(Cc2cc(C(=O)Nc3cccc([C@H](c4nncn4C)C4COC4)c3)cc(C(F)(F)F)c2)C1
C28H32F3N5O2
527.591000
MULALJFKIWSVSO-BVZFJXPGSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227004; PubChem:CID178290365
Local ready
Direct docking supported
E3L010940
BDB010940
BDBM227005
C[C@H]1CCCN(Cc2cc(C(=O)Nc3cccc([C@]4(c5nncn5C)C[C@@H](C)C4)c3)c(F)c(C(F)(F)F)c2)C1
C29H33F4N5O
543.609000
RBMVUVGBYXVXMY-RXEHIIAQSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227005
Local ready
Direct docking supported