E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L011001
BDB011001
US20260008770, Example 89
CC1CC(c2cccc(-n3cc4c(C(F)(F)F)cc(CN5CCC[C@@](C)(O)C5)cc4n3)c2)(c2nncn2C)C1
C29H33F3N6O
538.618000
NKIZHTOKYRMNBS-NIPITBOXSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227066; PubChem:CID178290419
Local ready
Direct docking supported
E3L011002
BDB011002
US20260008770, Example 90
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3cn(-c4cccc(C5(c6nncn6C)CC(CC#N)C5)c4)nc3c2)C1
C30H32F3N7
547.629000
OJWFUEMNLRAWKC-JPZAJBPPSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227067; PubChem:CID178290420
Local ready
Direct docking supported
E3L011003
BDB011003
US20260008770, Example 91
CC1CC(c2cncc(-n3cc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4n3)c2)(c2nncn2C)C1
C28H32F3N7
523.607000
SBLPTNPDKJVLOA-SIYOEGHHSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227068; PubChem:CID178290421
Local ready
Direct docking supported
E3L011004
BDB011004
BDBM227069
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3cn(-c4cccc([C@]5(c6nncn6C)C[C@@H](OC(F)(F)F)C5)c4)nc3c2)C1
C29H30F6N6O
592.588000
AFTWUEPYKOAGOB-SFBLDSMTSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227069
Local ready
Direct docking supported
E3L011005
BDB011005
BDBM227070
CCc1cc([C@]2(c3nncn3C)C[C@@H](C)C2)cc(-n2cnc3ccc(CN4CCC[C@H](C)C4)cc3c2=O)n1
C30H37N7O
511.674000
VCHNFJCNSQPPBX-FNFPNEPISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227070
Local ready
Direct docking supported
E3L011006
BDB011006
BDBM227071
C=Cc1cc([C@]2(c3nncn3C)C[C@@H](C)C2)cc(-n2cnc3ccc(CN4CCC[C@H](C)C4)cc3c2=O)n1
C30H35N7O
509.658000
BVGANKHDXKPMLG-FNFPNEPISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227071
Local ready
Direct docking supported
E3L011007
BDB011007
BDBM227072
CC(c1ccc2ncn(-c3cc([C@]4(c5nncn5C)C[C@@H](C)C4)cc(OCF)n3)c(=O)c2c1)N1CCC[C@H](C)C1
C30H36FN7O2
545.663000
VGVYEPAJYVOBHJ-IQUXKSBZSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227072
Local ready
Direct docking supported
E3L011008
BDB011008
BDBM227073
C[C@H]1CCCN(Cc2ccc3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(C5CC5)n4)c(=O)c3c2)C1
C31H37N7O
523.685000
WPUCWKSWWYSKHJ-VAKBQEFHSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227073
Local ready
Direct docking supported
E3L011009
BDB011009
BDBM227074
C#Cc1cc([C@]2(c3nncn3C)C[C@@H](C)C2)cc(-n2cnc3ccc(CN4CCC[C@H](C)C4)cc3c2=O)n1
C30H33N7O
507.642000
IADBDSBTNFKAIP-FNFPNEPISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227074
Local ready
Direct docking supported
E3L011010
BDB011010
BDBM227075
Cn1cnnc1[C@]1(c2cc(OCF)nc(-n3cnc4ccc(CN5CCC[C@H](F)C5)cc4c3=O)c2)C[C@H](C)C1
C28H31F2N7O2
535.599000
RDQIDAPLOSUJOS-GZDZOCAYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227075
Local ready
Direct docking supported
E3L011011
BDB011011
BDBM227076
Cn1cnnc1[C@]1(c2cc(OCF)nc(-n3cnc4cnc(CN5CCC[C@H](F)C5)cc4c3=O)c2)C[C@H](C)C1
C27H30F2N8O2
536.587000
NRAVBNBBXIOLFQ-GYERCMHNSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227076
Local ready
Direct docking supported
E3L011012
BDB011012
BDBM227077
C[C@H]1CCCN(Cc2cc3c(=O)n(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)cnc3cc2F)C1
C29H33F2N7O2
549.626000
MFZFONNELXWQDP-XFLNKKNVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227077
Local ready
Direct docking supported
E3L011013
BDB011013
US20260008770, Example 101
C#CC1CC(c2ccnc(-n3cnc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C30H30F3N7O
561.612000
MISVUXRIQGLQOX-QORSJFMISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227078; PubChem:CID178290431
Local ready
Direct docking supported
E3L011014
BDB011014
BDBM227079
Cn1cnnc1[C@]1(c2cc(OCF)nc(-n3cnc4c(C(F)(F)F)cc(CN5CCC[C@H](F)C5)cc4c3=O)c2)C[C@H](C)C1
C29H30F5N7O2
603.596000
BDPCOIQQRWOJBG-CJBMVKJXSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227079
Local ready
Direct docking supported
E3L011015
BDB011015
US20260008770, Example 103
CC1CC(c2cc(OC(F)F)nc(-n3cnc4c(C(F)(F)F)cc(C(C)N5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C31H34F5N7O2
631.650000
WPCZXQWRMQVFRR-MYCZZPCFSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227080; PubChem:CID178290433
Local ready
Direct docking supported
E3L011016
BDB011016
BDBM227081
[2H]C([2H])(c1cc(C(F)(F)F)c2ncn(-c3cccc([C@]4(c5nncn5C)C[C@@H](C)C4)c3)c(=O)c2c1)N1CCC[C@H](C)C1
C30H33F3N6O
552.641204
OPLYLGJCVDRCFK-HXUFRDODSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227081
Local ready
Direct docking supported
E3L011017
BDB011017
BDBM227082
Cn1cnnc1[C@]1(c2ccnc(-n3cnc4c(C(F)(F)F)cc(CN5CCC[C@H](CF)C5)cc4c3=O)c2)C[C@H](C)C1
C29H31F4N7O
569.607000
HYUBHTRYCIWTFY-BCRFLOQVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227082
Local ready
Direct docking supported
E3L011018
BDB011018
BDBM227083
C[C@@H]1CN(Cc2cc(C(F)(F)F)c3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)CCC1F
C30H32F5N7O2
617.623000
NZVFWPJEHPPSAD-WOVMZZQXSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227083
Local ready
Direct docking supported
E3L011019
BDB011019
BDBM227084
C=C(F)c1cc([C@]2(c3nncn3C)C[C@@H](C)C2)cc(-n2cnc3c(C(F)(F)F)cc(CN4CCC[C@H](C)C4)cc3c2=O)n1
C31H33F4N7O
595.645000
ODISKKCTZKFERN-XYSIDCHVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227084
Local ready
Direct docking supported
E3L011020
BDB011020
BDBM227085
Cn1cnnc1[C@]1(c2cc(OCF)nc(-n3cnc4c(C(F)(F)F)cc(CN5CCCC(C)(F)C5)cc4c3=O)c2)C[C@H](C)C1
C30H32F5N7O2
617.623000
OUHVFDXKEQLMAH-IOPLCCCZSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227085
Local ready
Direct docking supported