E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L011021
BDB011021
BDBM227086
CC1CN(Cc2cc(C(F)(F)F)c3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)CCC1(F)F
C30H31F6N7O2
635.613000
VPFPKAQFLJFPQZ-PMDKZGMCSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227086
Local ready
Direct docking supported
E3L011022
BDB011022
BDBM227087
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3ncn(-c4cc([C@]5(c6nncn6C6CCC6)C[C@@H](C)C5)ccn4)c(=O)c3c2)C1
C32H36F3N7O
591.682000
IPEOEWWNUWLCTK-VAKBQEFHSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227087
Local ready
Direct docking supported
E3L011023
BDB011023
BDBM227088
C[C@H]1CCCN(Cc2cc(F)c3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)C1
C29H33F2N7O2
549.626000
YGIDUNKJVPDSBO-XFLNKKNVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227088
Local ready
Direct docking supported
E3L011024
BDB011024
BDBM227089
C[C@H]1CCCN(Cc2ccc3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)C1
C29H34FN7O2
531.636000
QQIBXYUZHBDSIG-QWQFASRJSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227089
Local ready
Direct docking supported
E3L011025
BDB011025
US20260008770, Example 113
[2H]c1nnc(C2(c3ccnc(-n4cnc5c(C(F)(F)F)cc(CN6CCC[C@H](C)C6)cc5c4=O)c3)CC(C)C2)n1C(F)F
C29H30F5N7O
588.603102
ZJBMVKPHFUGRKY-KGNWANMCSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227090; PubChem:CID178290443
Local ready
Direct docking supported
E3L011026
BDB011026
BDBM227091
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](CF)C5)ccn4)c(=O)c3c2)C1
C29H31F4N7O
569.607000
JANCVYSYUKJUIG-JRZYIBAFSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227091
Local ready
Direct docking supported
E3L011027
BDB011027
BDBM227092
COc1cc([C@]2(c3nncn3C)C[C@@H](C)C2)cc(-n2cnc3c(C(F)(F)F)cc(CN4CCC[C@H](C)C4)cc3c2=O)n1
C30H34F3N7O2
581.643000
HXNIRMZHZFNJJK-XFLNKKNVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227092
Local ready
Direct docking supported
E3L011028
BDB011028
US20260008770, Example 116
C=Cn1cnnc1C1(c2ccnc(-n3ncc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4c3=O)c2)CC(C)C1
C30H32F3N7O
563.628000
VTXWWMFRMBFHMI-QORSJFMISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227093; PubChem:CID178290446
Local ready
Direct docking supported
E3L011029
BDB011029
US20260008770, Example 117
CC1CC(c2cc(OC(F)F)nc(-n3cnc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C30H32F5N7O2
617.623000
HNUBSIFTMCDRBL-XNSWBKEBSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227094; PubChem:CID178290447
Local ready
Direct docking supported
E3L011030
BDB011030
US20260008770, Example 118
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3ncn(-c4cc(C5(c6nncn6C)CC6(CC6)C5)ccn4)c(=O)c3c2)C1
C30H32F3N7O
563.628000
PKYQSVAOJVTZQH-IBGZPJMESA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227095; PubChem:CID178290448
Local ready
Direct docking supported
E3L011031
BDB011031
BDBM227096
C[C@H]1CCCN(Cc2cc(C(F)(F)F)c3ncn(-c4cc([C@]5(c6nncn6C6CC6)C[C@@H](C)C5)ccn4)c(=O)c3c2)C1
C31H34F3N7O
577.655000
ZEPLSBRQBWMJIJ-PRWCENSBSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227096
Local ready
Direct docking supported
E3L011032
BDB011032
BDBM227097
Cn1cnnc1[C@]1(c2ccnc(-n3cnc4c(C(F)(F)F)cc(CN5CCC6(CCO6)C5)cc4c3=O)c2)C[C@H](C)C1
C29H30F3N7O2
565.600000
OUAYZCXJOCBJOD-BPJZWELMSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227097
Local ready
Direct docking supported
E3L011033
BDB011033
US20260008770, Example 78
CC1CC(c2ccnc(-n3cnc4c(C(F)(F)F)cc(CN5CCC[C@H](C)C5)cc4c3=O)c2)(c2nncn2C)C1
C29H32F3N7O
551.617000
XADIXHNVHSRGOY-VURWPYGMSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB, PubChem
BindingDB:BDBM227098; PubChem:CID178290411
Local ready
Direct docking supported
E3L011034
BDB011034
BDBM227099
C[C@@H]1CN(Cc2ccc3ncn(-c4cc([C@]5(c6nncn6C)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)CCC1F
C29H33F2N7O2
549.626000
ZEHXETVKAAAXDS-KUGJXZKZSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227099
Local ready
Direct docking supported
E3L011035
BDB011035
BDBM227100
C[C@H]1CCCN(Cc2ccc3ncn(-c4cc([C@]5(c6nncn6C(F)F)C[C@@H](C)C5)cc(OCF)n4)c(=O)c3c2)C1
C29H32F3N7O2
567.616000
WIUPWZSRPBGQBL-XFLNKKNVSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM227100
Local ready
Direct docking supported
E3L011036
BDB011036
BDBM227335
COC(c1ccccc1)c1nc2nc(-c3noc(=O)[nH]3)nc(-c3cncc(Cl)c3)c2n1C[C@H]1CC[C@H](C)CC1
C28H28ClN7O3
546.031000
WIHYOFCDDPRAMS-XEDXNJDHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM227335
Local ready
Direct docking supported
E3L011037
BDB011037
BDBM227391
COC(C)(c1ccccc1F)c1nc2nc(-c3noc(=O)[nH]3)nc(-c3cncc(Cl)c3)c2n1C[C@H]1CC[C@H](C)CC1
C29H29ClFN7O3
578.048000
NBICRJMLZQGIGZ-HBKKXGJPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM227391
Local ready
Direct docking supported
E3L011038
BDB011038
BDBM227393
COC(C)(c1csc(C)n1)c1nc2nc(-c3n[nH]c(=O)o3)nc(-c3cncc(Cl)c3)c2n1C[C@H]1CC[C@H](C)CC1
C27H29ClN8O3S
581.102000
DOZGJJHZDVZJFT-QLEMOQGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM227393
Local ready
Direct docking supported
E3L011039
BDB011039
BDBM227394
COC(C)(c1ccccn1)c1nc2nc(-c3nc(=O)o[nH]3)nc(-c3cccc(Cl)c3)c2n1C[C@H]1CC[C@H](C)CC1
C29H30ClN7O3
560.058000
PVTGGEOCLYOQOH-KTYIESPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM227394
Local ready
Direct docking supported
E3L011040
BDB011040
BDBM227461
COC(C)(c1ccccn1)c1nc2nc(-c3n[nH]c(=O)o3)nc(-c3cccc(Cl)c3)c2n1C[C@H]1CC[C@H](C)CC1
C29H30ClN7O3
560.058000
RRASPEQACBMEGP-KTYIESPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM227461
Local ready
Direct docking supported