E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L012061
BDB012061
BDBM254006
CN[C@@H](C)C(=O)Nc1ccc(-c2c(-c3cccnc3OC)nc3ccccn23)c(C#Cc2ccc3c(C)nccc3c2)n1
C34H29N7O2
567.653000
OOIACXVWWQFCNE-QFIPXVFZSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM254006; PubChem:CID118862995
Local ready
Direct docking supported
E3L012062
BDB012062
BDBM254008
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](C[C@H](C)C(F)(F)F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C30H25Cl2F4N3O5
654.444000
XYTHOOGTVUYJBG-KXMGABSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254008
Local ready
Direct docking supported
E3L012063
BDB012063
BDBM254009
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](C[C@@H](C)C(F)(F)F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C30H25Cl2F4N3O5
654.444000
XYTHOOGTVUYJBG-XSNHHLJVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254009
Local ready
Direct docking supported
E3L012064
BDB012064
BDBM254010
COc1cc(C(N)=O)ccc1NC(=O)[C@@H]1N[C@@H](C[C@H](C)C(F)(F)F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C30H26Cl2F4N4O4
653.460000
BEKZQVIDIKMVPK-KXMGABSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254010
Local ready
Direct docking supported
E3L012065
BDB012065
BDBM254011
COc1cc(C(N)=O)ccc1NC(=O)[C@@H]1N[C@@H](C[C@@H](C)C(F)(F)F)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C30H26Cl2F4N4O4
653.460000
BEKZQVIDIKMVPK-XSNHHLJVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254011
Local ready
Direct docking supported
E3L012066
BDB012066
BDBM254012
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)CF)[C@@]2(C(=O)Nc3cc(Cl)ccc32)C1c1cccc(Cl)c1F
C31H29Cl2F2N3O5
632.491000
PKUBNXZBVDLSFQ-VOSTZOEXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254012
Local ready
Direct docking supported
E3L012067
BDB012067
BDBM254013
COc1cc(C(N)=O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)CF)[C@@]2(C(=O)Nc3cc(Cl)ccc32)C1c1cccc(Cl)c1F
C31H30Cl2F2N4O4
631.507000
INQDNFRBWRWRNC-VOSTZOEXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254013
Local ready
Direct docking supported
E3L012068
BDB012068
BDBM254014
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)CF)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C31H29Cl2F2N3O5
632.491000
PKUBNXZBVDLSFQ-ISKXDESKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254014
Local ready
Direct docking supported
E3L012069
BDB012069
BDBM254016
CCOC(=O)c1ccc(NC(=O)[C@@H]2N[C@@H](C[C@@H](C)C(F)(F)F)[C@@]3(C(=O)Nc4cc(Cl)ccc43)C2c2cccc(Cl)c2F)c(OC)c1
C32H29Cl2F4N3O5
682.498000
KBLDTSBKELBYLQ-JRUYRZCXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254016
Local ready
Direct docking supported
E3L012070
BDB012070
BDBM254021
COC(=O)c1ccc(NC(=O)[C@@H]2N[C@@H](CC3(CF)CC3)C3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)c(OC)c1
C32H29Cl2F2N3O5
644.502000
IOAIQZCOATXIRX-BUVORYGASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254021
Local ready
Direct docking supported
E3L012071
BDB012071
BDBM254022
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC2(CF)CC2)C2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C31H27Cl2F2N3O5
630.475000
NTXATSJNATTZSH-QTCVMIJUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254022
Local ready
Direct docking supported
E3L012072
BDB012072
BDBM254023
COc1cc(C(N)=O)ccc1NC(=O)[C@@H]1N[C@@H](CC2(CF)CC2)C2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C31H28Cl2F2N4O4
629.491000
GQORJGJPBDYZJA-QTCVMIJUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254023
Local ready
Direct docking supported
E3L012073
BDB012073
BDBM254024
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC2(CF)CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C31H27Cl2F2N3O5
630.475000
NTXATSJNATTZSH-ISKXDESKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254024
Local ready
Direct docking supported
E3L012074
BDB012074
BDBM254025
COc1cc(C(N)=O)ccc1NC(=O)[C@@H]1N[C@@H](CC2(CF)CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C31H28Cl2F2N4O4
629.491000
GQORJGJPBDYZJA-ISKXDESKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM254025
Local ready
Direct docking supported
E3L012075
BDB012075
BDBM255476
COc1cc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(NS(C)(=O)=O)c4OC)c4ccccc34)ccn2)ccc1C(=O)O
C36H37N5O8S
699.786000
QFXFIEVXAUEHEV-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM255476; PubChem:CID121249201
Local ready
Direct docking supported
E3L012076
BDB012076
Gsk-lsd1
c1ccc([C@@H]2C[C@H]2NC2CCNCC2)cc1
C14H20N2
216.328000
BASFYRLYJAZPPL-UONOGXRCSA-N P35869 Aryl hydrocarbon receptor
BindingDB, PubChem
BindingDB:BDBM256459; PubChem:CID71522234
Local ready
Direct docking supported
E3L012077
BDB012077
MLi-2
C[C@@H]1CN(c2cc(-c3n[nH]c4ccc(OC5(C)CC5)cc34)ncn2)C[C@H](C)O1
C21H25N5O2
379.464000
ATUUNJCZCOMUKD-OKILXGFUSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM257207; PubChem:CID78319901
Local ready
Direct docking supported
E3L012078
BDB012078
BDBM259324
Cc1cc(C)c(CNC(=O)c2scc(OC(C)C)c2C)c(=O)[nH]1
C17H22N2O3S
334.441000
ZZWWTDIYKHELAP-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM259324; PubChem:CID86764798
Local ready
Direct docking supported
E3L012079
BDB012079
BDBM259325
CCN(c1csc(C(=O)NCc2c(C)cc(C)[nH]c2=O)c1C)C1CCOCC1
C21H29N3O3S
403.548000
DNSRVUFQXXUPCK-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM259325; PubChem:CID86764909
Local ready
Direct docking supported
E3L012080
BDB012080
BDBM259326
CCN(c1c(Cl)sc(C(=O)NCc2c(C)cc(C)[nH]c2=O)c1C)C1CCOCC1
C21H28ClN3O3S
437.993000
PIUDMQZOXJMZKR-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM259326; PubChem:CID86764910
Local ready
Direct docking supported