E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L013241
BDB013241
US9580437, Example 241
Fc1ccc2c(c1CNc1ncc(-n3cncn3)c3nncn13)CCO2
C16H13FN8O
352.333000
DGZUHZNLUIAYRM-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM291926; PubChem:CID121432924
Local ready
Direct docking supported
E3L013242
BDB013242
US9580437, Example 242
Cc1ncccc1-c1cnc(NCc2c(F)ccc3c2C(O)CO3)n2cnnc12
C20H17FN6O2
392.394000
PHHIHVIOVGUMSY-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM291927; PubChem:CID121433108
Local ready
Direct docking supported
E3L013243
BDB013243
US9580437, Example 243
OCc1ncccc1-c1cnc(NCc2c(F)ccc3c2C(O)CO3)n2cnnc12
C20H17FN6O3
408.393000
BDGYMZHPAPDHFB-UHFFFAOYSA-N O75530 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM291928; PubChem:CID121433002
Local ready
Direct docking supported
E3L013244
BDB013244
BDBM291929

O75530 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB
BindingDB:BDBM291929
Needs structure
Structure source missing
E3L013245
BDB013245
US9580437, Example 245
Cc1ncc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cnnc23)n1C
C19H18FN7O
379.399000
BPVVBXTWDZKTIU-UHFFFAOYSA-N O75530 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM291930; PubChem:CID121433032
Local ready
Direct docking supported
E3L013246
BDB013246
Cirtuvivint
CN1CCN(c2cc(C(=O)Nc3cc4cc(-c5cnn(C)c5)ccc4cn3)ccn2)CC1
C24H25N7O
427.512000
BQWWOBKMDWACGC-UHFFFAOYSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM293424; PubChem:CID132056570
Local ready
Direct docking supported
E3L013247
BDB013247
QC6352
CN(c1ccccc1)c1ccc2c(c1)CCC[C@H]2CNc1cnccc1C(=O)O
C24H25N3O2
387.483000
XSMABFRQESMONQ-SFHVURJKSA-N Q8NHM5 Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM293660; PubChem:CID118598059
Local ready
Direct docking supported
E3L013248
BDB013248
BDBM293920
O=c1[nH]nc2c3c(cccc13)N=C1CNCCN12
C12H11N5O
241.254000
MDCGHJKIHMHTTA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293920; PubChem:CID134405426
Local ready
Direct docking supported
E3L013249
BDB013249
BDBM293921
CCN1CCN2C(=Nc3cccc4c(=O)[nH]nc2c34)C1
C14H15N5O
269.308000
BOBFZLVWJCESKN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293921; PubChem:CID134405431
Local ready
Direct docking supported
E3L013250
BDB013250
BDBM293922
CN1CCN2C(=Nc3cccc4c(=O)[nH]nc2c34)C1
C13H13N5O
255.281000
DUZYWRWFLZQBRP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293922; PubChem:CID134405429
Local ready
Direct docking supported
E3L013251
BDB013251
BDBM293923
CC(C)N1CCN2C(=Nc3cccc4c(=O)[nH]nc2c34)C1
C15H17N5O
283.335000
ROJPYQCGBRMTFW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293923; PubChem:CID134405432
Local ready
Direct docking supported
E3L013252
BDB013252
BDBM293924
O=c1[nH]nc2c3c(cccc13)N=C1CN(Cc3ccccc3)CCN12
C19H17N5O
331.379000
YCYBDAIMDDNGBM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293924; PubChem:CID134405433
Local ready
Direct docking supported
E3L013253
BDB013253
BDBM293925
C=C(C)CCN1CCN2C(=Nc3cccc4c(=O)[nH]nc2c34)C1
C17H19N5O
309.373000
VUZVSXKVIPVGLB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM293925; PubChem:CID134405430
Local ready
Direct docking supported
E3L013254
BDB013254
BDBM297741
OC(COc1cccc(CNC2CCCC2)c1)CN1Cc2ccccc2C1
C23H30N2O2
366.505000
XAKRWZAZKPLRIX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM297741; PubChem:CID76902416
Local ready
Direct docking supported
E3L013255
BDB013255
US10125100, Example 2
COc1cc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(NS(C)(=O)=O)c4OC)c4ccccc34)ccn2)ccc1C(=O)NCCN1CCOCC1
C42H49N7O8S
811.962000
BPROBXOFSXWRJR-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM298375; PubChem:CID121255251
Local ready
Direct docking supported
E3L013256
BDB013256
BDBM298379
COc1cc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(C(N)=O)c4OC)c4ccccc34)ccn2)ccc1C(=O)NCCN1CCOCC1
C42H47N7O7
761.880000
OWFCLENUNKNIMY-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM298379; PubChem:CID121255225
Local ready
Direct docking supported
E3L013257
BDB013257
BDBM298380
COCCOCCOCCNC(=O)c1ccc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(NS(C)(=O)=O)c4OC)c4ccccc34)ccn2)cc1OC
C43H52N6O10S
844.988000
KDSZOXKIGJOWQA-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM298380
Local ready
Direct docking supported
E3L013258
BDB013258
BDBM298381
COCCOCCOCCNC(=O)c1ccc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(C(N)=O)c4OC)c4ccccc34)ccn2)cc1OC
C43H50N6O9
794.906000
RPKMWNOMQDRWNX-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM298381
Local ready
Direct docking supported
E3L013259
BDB013259
BDBM298382
COc1cc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(NS(C)(=O)=O)c4OC)c4ccccc34)ccn2)ccc1C(=O)NCCN1CC[S+]([O-])CC1
C42H49N7O8S2
844.029000
CPVAUCCEUDAMED-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM298382
Local ready
Direct docking supported
E3L013260
BDB013260
US10125100, Example 8
COCCOCCOCCOc1ccc(Nc2cc(Oc3ccc(NC(=O)Nc4cc(C(C)(C)C)cc(NS(C)(=O)=O)c4OC)c4ccccc34)ccn2)cc1C#N
C42H48N6O9S
812.946000
WGFQWNGYIXQPPT-UHFFFAOYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM298383; PubChem:CID121255356
Local ready
Direct docking supported