E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023641
BDB023641
BDBM535783
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OC[C@@H](C)O)c1ccc(Cl)cc1)[C@H]1CC[C@H](O)CC1
C32H34ClFN4O5
609.098000
MFJXVQCJOJBJSN-ZDDMJVHESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM535783
Local ready
Direct docking supported
E3L023642
BDB023642
US11236047, Example 524
CCC(O)(CN1CCNCC1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C31H34Cl2FN5O4
630.548000
DOOLEYVFQATQEL-JOINGXBXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535785; PubChem:CID135282089
Local ready
Direct docking supported
E3L023643
BDB023643
US11236047, Example 526
CCC(O)(CN1CC[C@@H](O)C1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C31H33Cl2FN4O5
631.532000
KKQVYJKFFYTVGQ-VPAANPLTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535786; PubChem:CID137498040
Local ready
Direct docking supported
E3L023644
BDB023644
US11236047, Example 528
CCC(O)(CN(C)C)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C29H31Cl2FN4O4
589.495000
IMWIKKNQOUEPQC-MVAUJPHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535788; PubChem:CID135282169
Local ready
Direct docking supported
E3L023645
BDB023645
US11236047, Example 530
CCC(O)(CN1CCNCC1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1
C29H32Cl2FN5O4
604.510000
ISTMKLDBKUEYGB-YPJJGMIRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535789; PubChem:CID135282086
Local ready
Direct docking supported
E3L023646
BDB023646
US11236047, Example 532
CCC(O)(CN1CCN(C)CC1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1
C30H34Cl2FN5O4
618.537000
OVXCRCRSYWAUFQ-BDCODIICSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535790; PubChem:CID135282348
Local ready
Direct docking supported
E3L023647
BDB023647
US11236047, Example 534
CCC(O)(CN1CCN(C)CC1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCC1(C#N)CC1)c1ccc(Cl)cc1
C33H35Cl2FN6O3
653.586000
GJZOHGAQYXUXCM-ZHZZGXISSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535791; PubChem:CID135282707
Local ready
Direct docking supported
E3L023648
BDB023648
US11236047, Example 522
CCC(O)(CN1CCN(C)CC1)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C32H36Cl2FN5O4
644.575000
UWEXKSFZEKXFGI-LOKXLOOWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535792; PubChem:CID135282597
Local ready
Direct docking supported
E3L023649
BDB023649
US11236047, Example 553
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OC)c1ccc(Cl)cc1)C1CCN(C)CC1
C29H31Cl2FN4O3
573.496000
RXWFSQUACIFPTB-URLMMPGGSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535793; PubChem:CID135283031
Local ready
Direct docking supported
E3L023650
BDB023650
US11236047, Example 559
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1CCN(C)CC1
C30H33Cl2FN4O4
603.522000
MTVISPOCUBWYQU-XZWHSSHBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535794; PubChem:CID135282534
Local ready
Direct docking supported
E3L023651
BDB023651
US11236047, Example 562
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OC[C@@H](C)O)c1ccc(Cl)cc1)C1CCN(C)CC1
C31H35Cl2FN4O4
617.549000
VBOLIJYMGSQRFX-MUMCFHHVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535795; PubChem:CID135282478
Local ready
Direct docking supported
E3L023652
BDB023652
US11236047, Example 550
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OC)c1ccc(Cl)cc1)C1CCN(CCO)CC1
C30H33Cl2FN4O4
603.522000
JRFKQIQQIAJEPR-XZWHSSHBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535796; PubChem:CID135282931
Local ready
Direct docking supported
E3L023653
BDB023653
US11236047, Example 513
CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1
C28H26ClFN4O4
536.991000
XJGKRRJKFHLFEF-MUUNZHRXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535797; PubChem:CID163407656
Local ready
Direct docking supported
E3L023654
BDB023654
US11236047, Example 577
CCC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1
C29H28ClFN4O4
551.018000
XFDBIZMVEPJQIF-ZBAATNBSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535798; PubChem:CID163407657
Local ready
Direct docking supported
E3L023655
BDB023655
US11236047, Example 491
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cc1OC)[C@@]2(OCCO)c1ccc(Cl)cc1)c1cn(C)cn1
C30H29Cl2FN4O5
615.489000
QTAAEQKGSBEGOC-BDCODIICSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535799; PubChem:CID137498015
Local ready
Direct docking supported
E3L023656
BDB023656
US11236047, Example 578
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1(F)CCOCC1
C28H27Cl2F2N3O5
594.442000
WCODONRZQFMBLE-SVNIRARHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535800; PubChem:CID135283143
Local ready
Direct docking supported
E3L023657
BDB023657
8-Methyl-6-oxo-2,7-diazaspiro[4.4]nonane-2-carbonitrile
CC1C[C@]2(CCN(C#N)C2)C(=O)N1
C9H13N3O
179.223000
QJSGPSYFYHOZNH-NETXQHHPSA-N Q6GQQ9 OTU domain-containing protein 7B
BindingDB, PubChem
BindingDB:BDBM535802; PubChem:CID163407658
Local ready
Direct docking supported
E3L023658
BDB023658
US11236092, Example 83
CC1C[C@@]2(CCN(C#N)C2)C(=O)N1
C9H13N3O
179.223000
QJSGPSYFYHOZNH-NHSZFOGYSA-N Q6GQQ9 OTU domain-containing protein 7B
BindingDB, PubChem
BindingDB:BDBM535803; PubChem:CID163407659
Local ready
Direct docking supported
E3L023659
BDB023659
US11236092, Example 84
N#CN1CC[C@@]2(CC(c3ccccc3)NC2=O)C1
C14H15N3O
241.294000
NSGFJJKNIQRTHW-TYZXPVIJSA-N Q6GQQ9 OTU domain-containing protein 7B
BindingDB, PubChem
BindingDB:BDBM535804; PubChem:CID163407660
Local ready
Direct docking supported
E3L023660
BDB023660
US11236047, Example 515
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C)nc1C(=O)O)[C@@]2(OC)c1ccc(Cl)cc1)C1(F)CCOCC1
C31H31ClF2N2O6
601.046000
XSHRXYPCIVWDNP-FIRIVFDPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535805; PubChem:CID135282501
Local ready
Direct docking supported