E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023621
BDB023621
US11236047, Example 426
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(O[C@@H]1CCOC1)c1ccc(Cl)cc1)c1cn(C)cn1
C32H29ClFN5O4
602.066000
XHCNIWPQGUYHCF-CYMJYBMMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535756; PubChem:CID137497987
Local ready
Direct docking supported
E3L023622
BDB023622
US11236047, Example 438
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OC[C@@H](C)O)c1ccc(Cl)cc1)c1cn(C)cn1
C31H29ClFN5O4
590.055000
YDFBJRFMXYRLJM-VSVGVIERSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535757; PubChem:CID135282353
Local ready
Direct docking supported
E3L023623
BDB023623
US11236047, Example 440
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1)c1cn(C)cn1
C33H31ClFN5O4
616.093000
WNVLDRQSRWIKSR-ZHZZGXISSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535759; PubChem:CID135282541
Local ready
Direct docking supported
E3L023624
BDB023624
US11236047, Example 441
Cn1cc(C(O)(CF)c2ccc3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1
C31H27ClFN5O4
588.039000
YVIAFQAKHVRQOG-JCHZNZEOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535760; PubChem:CID137513400
Local ready
Direct docking supported
E3L023625
BDB023625
US11236047, Example 451
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)C(=O)NC3CCN(C)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
C30H32Cl2N4O4
583.516000
WCTSDTWABMUYDH-BDCODIICSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535762; PubChem:CID135282606
Local ready
Direct docking supported
E3L023626
BDB023626
US11236092, Example 44
N#CN1CCC2(Cc3cc(-c4ccc(F)cc4)ccc3NC2=O)C1
C19H16FN3O
321.355000
TWRBYEBVRGHILJ-UHFFFAOYSA-N Q6GQQ9 OTU domain-containing protein 7B
BindingDB, PubChem
BindingDB:BDBM535764; PubChem:CID137378661
Local ready
Direct docking supported
E3L023627
BDB023627
US11236047, Example 453
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)C(=O)Nc3cnn(C)c3)cc2C(=O)N1Cc1ccc(Cl)cn1
C28H25Cl2N5O4
566.445000
LDOZVXKNXVTXJP-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535765; PubChem:CID135282732
Local ready
Direct docking supported
E3L023628
BDB023628
US11236047, Example 456
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)C(=O)NC3CN(C)C3)cc2C(=O)N1Cc1ccc(Cl)cn1
C28H28Cl2N4O4
555.462000
KCMILRVZTKUFMT-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535767; PubChem:CID135282944
Local ready
Direct docking supported
E3L023629
BDB023629
US11236047, Example 459
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CCN(CC(=O)O)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
C30H30Cl2FN3O5
602.490000
LEBZOJICUSODDT-BDCODIICSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535768; PubChem:CID135283062
Local ready
Direct docking supported
E3L023630
BDB023630
US11236047, Example 460
Cc1cnc(CN2C(=O)c3cc(C(C)(C)O)ccc3[C@]2(OCC2(CO)CC2)c2ccc(Cl)cc2)cn1
C28H30ClN3O4
508.018000
ZWMXXGFGENSWSG-MUUNZHRXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535769; PubChem:CID135282582
Local ready
Direct docking supported
E3L023631
BDB023631
US11236047, Example 461
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OC1CCC(O)C1)c1ccc(Cl)cc1)c1cn(C)cn1
C32H30ClFN6O4
617.081000
SIFDSZDGKUGJTO-NQSPBDJXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535770; PubChem:CID137512742
Local ready
Direct docking supported
E3L023632
BDB023632
BDBM535771
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1C[C@@H](O)C1)c1ccc(Cl)cc1)c1cn(C)cn1
C30H28Cl2FN5O4
612.489000
PUEPUEVWUMLLPQ-VELDXABHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM535771
Local ready
Direct docking supported
E3L023633
BDB023633
US11236047, Example 466
C=C(CO)CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(O)(CC)c3cn(C)cn3)cc2C(=O)N1Cc1ccc(C#N)cn1
C32H29ClFN5O4
602.066000
OPDQOJKZFYMCJQ-IADGFXSZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535772; PubChem:CID135282656
Local ready
Direct docking supported
E3L023634
BDB023634
US11236047, Example 468
Cn1cnc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ncc(C#N)cn2)[C@@]3(OCC2(F)COC2)c2ccc(Cl)cc2)c1
C30H25ClF2N6O4
607.017000
CCIHRCXDXNUEJC-FUJFQHJFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535773; PubChem:CID135282979
Local ready
Direct docking supported
E3L023635
BDB023635
US11236047, Example 470
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCC1(F)COC1)c1ccc(Cl)cc1)c1cn(C)cn1
C31H27ClF2N6O4
621.044000
DGWQHGBOIMCQFW-NLIBRCFJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535774; PubChem:CID135282631
Local ready
Direct docking supported
E3L023636
BDB023636
BDBM535776
CCC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(O[C@H]1C[C@H](CO)C1)c1ccc(Cl)cc1)c1cn(C)cn1
C32H30ClFN6O4
617.081000
LWGPMDOLLXQRCR-QFNVXXLUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM535776
Local ready
Direct docking supported
E3L023637
BDB023637
US11236047, Example 493
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1)C1(F)CCOCC1
C30H29Cl2F2N3O5
620.480000
YHOMQLQCVYYRQC-GQMPWXHXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535777; PubChem:CID135282598
Local ready
Direct docking supported
E3L023638
BDB023638
BDBM535780
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(O[C@H]1C[C@@H](O)C1)c1ccc(Cl)cc1)[C@H]1CC[C@H](O)CC1
C31H32Cl2FN3O5
616.517000
IASXKSYUAIXXDE-NWFWUAPVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM535780
Local ready
Direct docking supported
E3L023639
BDB023639
US11236047, Example 501
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1(F)CCOCC1
C29H29Cl2F2N3O5
608.469000
CPLOBKSITDKJJL-FQLXRVMXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535781; PubChem:CID137497958
Local ready
Direct docking supported
E3L023640
BDB023640
US11236047, Example 509
CC[C@@](O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(C#N)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1(F)CCOCC1
C30H29ClF2N4O5
599.034000
FRAVIXIBGFVNQU-LOYHVIPDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535782; PubChem:CID135282723
Local ready
Direct docking supported