E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025621
BDB025621
BDBM552953
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H31F4N7O3
589.594000
CMLDSGMHBCTTQH-CALCHBBNSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552953; PubChem:CID138542049
Local ready
Direct docking supported
E3L025622
BDB025622
BDBM552954
CN1CCN(c2cc(F)c(-c3cnc(N4CCCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C26H27F4N7O2
545.541000
HUCHWMVKXDSHCR-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552954; PubChem:CID138541705
Local ready
Direct docking supported
E3L025623
BDB025623
BDBM552955
CN1CCN(c2cc(F)c(-c3cnc(NC4CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C25H25F4N7O2
531.514000
XHGDUSOCGSBMTC-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552955; PubChem:CID137376950
Local ready
Direct docking supported
E3L025624
BDB025624
BDBM552956
CN1CCN(c2cc(F)c(-c3cnc(NC4CCCCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H31F4N7O2
573.595000
RRQBQDOLKJVCNU-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552956; PubChem:CID137376870
Local ready
Direct docking supported
E3L025625
BDB025625
BDBM552957
CCOc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)CC3)cc2F)cn1
C24H24F4N6O3
520.487000
OFLSDQKDUXBXCT-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552957; PubChem:CID137376975
Local ready
Direct docking supported
E3L025626
BDB025626
BDBM552958
Cc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)CC3)cc2F)cn1
C23H22F4N6O2
490.461000
MONYSZXYDXDGEK-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552958; PubChem:CID137376992
Local ready
Direct docking supported
E3L025627
BDB025627
BDBM552959
CN1CCN(c2cc(F)c(-c3ccc(NC4CCCCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H32F4N6O2
572.607000
KCOMOZYHSDZIRW-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552959; PubChem:CID137377503
Local ready
Direct docking supported
E3L025628
BDB025628
BDBM552960
CN1CCN(c2cc(F)c(-c3cnc(O)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C22H20F4N6O3
492.433000
XXSLMFWASLUDIS-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552960; PubChem:CID137376787
Local ready
Direct docking supported
E3L025629
BDB025629
US11319287, Example 16
N#CN1CCC[C@H]1C(=O)N1CCc2cc(-c3ccno3)ccc21
C17H16N4O2
308.341000
ZJKVBBCHWJGSFD-HNNXBMFYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM552961; PubChem:CID164607817
Local ready
Direct docking supported
E3L025630
BDB025630
BDBM552962
CN1CCN(c2cc(F)c(-c3cnc(C#N)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C23H19F4N7O2
501.444000
CDBKROHOJVKZNJ-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552962; PubChem:CID137377210
Local ready
Direct docking supported
E3L025631
BDB025631
BDBM552963
CN1CCN(c2cc(F)c(-c3cnc(OCC(F)(F)F)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C24H21F7N6O3
574.457000
YIGUOFOBBBPQLX-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552963; PubChem:CID137377288
Local ready
Direct docking supported
E3L025632
BDB025632
BDBM552964
CN1CCN(c2cc(F)c(-c3cncnc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C22H20F4N6O2
476.434000
QGDHQOJSPUAKSA-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552964; PubChem:CID137376966
Local ready
Direct docking supported
E3L025633
BDB025633
BDBM552965
COc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)CC3)cc2F)c(OC)n1
C24H24F4N6O4
536.486000
NXSYJUANRFWWGT-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552965; PubChem:CID137377663
Local ready
Direct docking supported
E3L025634
BDB025634
BDBM552966
CN1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CC1
C26H28F3N7O3
543.550000
UJCBRBGSYIDHKB-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552966; PubChem:CID137377081
Local ready
Direct docking supported
E3L025635
BDB025635
BDBM552967
CN(C)C1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C27H29F4N7O3
575.567000
ZIWKHOHCZXDNQD-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552967; PubChem:CID137377683
Local ready
Direct docking supported
E3L025636
BDB025636
BDBM552968
CN1CCN(c2cc(F)c(C3=CCOCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C23H24F4N4O3
480.462000
MCKHRDBCHQEZEN-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552968; PubChem:CID137377127
Local ready
Direct docking supported
E3L025637
BDB025637
BDBM552969
CN1CCN(c2cc(F)c(C3=CCNCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C23H25F4N5O2
479.478000
LBCCPUPFKKIKMY-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552969; PubChem:CID137377091
Local ready
Direct docking supported
E3L025638
BDB025638
BDBM552970
CN1CCN(c2cc(F)ccc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C18H18F4N4O2
398.360000
LWTXKPMUOFWYDS-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552970; PubChem:CID137377213
Local ready
Direct docking supported
E3L025639
BDB025639
US11319299, Example 25
Cc1cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)ccc1F
C29H34F2N6O2
536.627000
CRLXCSCPDXUEGK-BGYRXZFFSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552971; PubChem:CID137376879
Local ready
Direct docking supported
E3L025640
BDB025640
BDBM552972
C[C@@H]1CN(c2cc(F)ccc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C20H22F4N4O2
426.414000
MSVVEQMGBXUFDN-TXEJJXNPSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552972; PubChem:CID138542230
Local ready
Direct docking supported