E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025881
BDB025881
US11319299, Example 273
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C30H35F4N7O3
617.648000
VRJIKZBYTFROSJ-GBESFXJTSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553218; PubChem:CID138551333
Local ready
Direct docking supported
E3L025882
BDB025882
BDBM553219
COc1cc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)ncn1
C30H33F4N7O3
615.632000
LJYNCYOEUIDXJX-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553219
Local ready
Direct docking supported
E3L025883
BDB025883
BDBM553220
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(Cl)cn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H30ClF4N7O2
620.051000
DEBDQMYFIMBSRR-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553220
Local ready
Direct docking supported
E3L025884
BDB025884
BDBM553221
CCOC(=O)c1ccnc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)n1
C32H35F4N7O4
657.669000
KOMYZHWERXGMSB-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553221
Local ready
Direct docking supported
E3L025885
BDB025885
BDBM553222
CNC1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C26H27F4N7O3
561.540000
IEQXGXFBBLGMTJ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553222; PubChem:CID137377113
Local ready
Direct docking supported
E3L025886
BDB025886
US11319299, Example 279
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C)CC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C29H34F4N8O2
602.637000
DQTHXSJKHKMLNF-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553223; PubChem:CID138551544
Local ready
Direct docking supported
E3L025887
BDB025887
US11319299, Example 280
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(O)cc(C(F)(F)F)c2)C[C@H](C)N1C
C29H32F4N6O3
588.606000
XPEVVCQFBFUDTA-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553224; PubChem:CID137377204
Local ready
Direct docking supported
E3L025888
BDB025888
US11319299, Example 281
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(O)c2)C[C@H](C)N1C
C28H33FN6O3
520.609000
BBSKAFJIOXPDNK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553225; PubChem:CID137376890
Local ready
Direct docking supported
E3L025889
BDB025889
US11319299, Example 282
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c(O)cnc3ccccc23)C[C@H](C)N1C
C31H34FN7O3
571.657000
PIEUITOJHWUOLV-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553226; PubChem:CID138541638
Local ready
Direct docking supported
E3L025890
BDB025890
US11319299, Example 283
CN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)nc2C(F)(F)F)C1
C26H30F4N8O2
562.572000
PFYCWMDTXIYYTR-QGZVFWFLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553227; PubChem:CID138541648
Local ready
Direct docking supported
E3L025891
BDB025891
US11319299, Example 284
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)nc2C(F)(F)F)CCN1C
C26H30F4N8O2
562.572000
BRBNCQUKOWCIAU-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553228; PubChem:CID138551465
Local ready
Direct docking supported
E3L025892
BDB025892
BDBM553229
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)N(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H34F4N6O3
578.611000
CGNPXNSJJYAWGW-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553229
Local ready
Direct docking supported
E3L025893
BDB025893
BDBM553230
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)N4CCCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H36F4N6O3
604.649000
NNTXMWORUUPKEK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553230
Local ready
Direct docking supported
E3L025894
BDB025894
BDBM553231
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)N4CCN(C)CC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H39F4N7O3
633.691000
AUPWGPJYRPQYNH-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553231
Local ready
Direct docking supported
E3L025895
BDB025895
BDBM553232
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)Oc4ccccc4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H33F4N5O4
627.639000
XQJLBWUQYHCBIE-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553232
Local ready
Direct docking supported
E3L025896
BDB025896
BDBM553233
C[C@@H]1CC(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)C[C@H](C)O1
C32H41F4N5O3
619.704000
ZDFBRPDDFCVAKI-KJEIRTBHSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553233
Local ready
Direct docking supported
E3L025897
BDB025897
US11319299, Example 290
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3
588.606000
PODUHTRDZORXNJ-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553234; PubChem:CID137377525
Local ready
Direct docking supported
E3L025898
BDB025898
US11319299, Example 291
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(O)cc(F)c2F)C[C@H](C)N1C
C28H31F3N6O3
556.589000
AFEJHDQULKSWMA-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553235; PubChem:CID138542025
Local ready
Direct docking supported
E3L025899
BDB025899
BDBM553236
C[C@@H]1CN(c2cc(F)c(-c3ccnc(OCC4CCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N5O3
587.618000
BFOIADAMTOTYRL-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553236; PubChem:CID137376810
Local ready
Direct docking supported
E3L025900
BDB025900
BDBM553237
C[C@@H]1CN(c2cc(F)c(-c3ccnc(OCC(C)(C)C)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N5O3
589.634000
RGYFFDAKCGXFNN-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553237; PubChem:CID137377247
Local ready
Direct docking supported