E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025841
BDB025841
US11319299, Example 228
C[C@@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)cc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H34F4N4O3
586.630000
XUPOVLZXYRJULS-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553178; PubChem:CID137376770
Local ready
Direct docking supported
E3L025842
BDB025842
US11319299, Example 229
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(F)c2F)C[C@H](C)N1C
C28H31F3N6O2
540.590000
KXCUSVGDGUDLND-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553179; PubChem:CID138541612
Local ready
Direct docking supported
E3L025843
BDB025843
US11319299, Example 230
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2Cl)CCN1C
C27H29ClF2N6O2
543.018000
GIMWIECNKXXFDO-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553180; PubChem:CID138551553
Local ready
Direct docking supported
E3L025844
BDB025844
BDBM553181
C[C@@H]1CN(c2cc(F)c(C3=CCN(C4CCCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H37F4N5O2
575.651000
KMZFLYSAJJITBM-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553181; PubChem:CID137376794
Local ready
Direct docking supported
E3L025845
BDB025845
BDBM553182
COc1ccc(C(C)N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)cc1
C34H39F4N5O3
641.710000
XSSOXXNFYDFZEN-CBQGHPETSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553182
Local ready
Direct docking supported
E3L025846
BDB025846
BDBM553183
CCC(C)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C29H37F4N5O2
563.640000
CDMXYBNBAANWGM-YQQQUEKLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553183; PubChem:CID137376896
Local ready
Direct docking supported
E3L025847
BDB025847
BDBM553184
CN(C)[C@@H]1CCN(c2cc(F)c(-c3ccc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C28H30F4N6O3
574.579000
OEYRTMLSTIVAKG-GOSISDBHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553184; PubChem:CID137376823
Local ready
Direct docking supported
E3L025848
BDB025848
BDBM553185
C[C@@H]1CN(c2cc(F)c(C3=CCN(C4COC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H33F4N5O3
563.596000
GQCUSBXSNDYFBA-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553185; PubChem:CID137376859
Local ready
Direct docking supported
E3L025849
BDB025849
BDBM553186
C[C@@H]1CN(c2cc(F)c(C3CCNCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H31F4N5O2
509.548000
QUMZRCRSWOVIBR-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553186; PubChem:CID137377236
Local ready
Direct docking supported
E3L025850
BDB025850
BDBM553187
CN(C)[C@@H]1CCN(c2cc(F)c(-c3ccc(O)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C24H23F4N5O3
505.472000
CUQNYXBLCFYCSF-CQSZACIVSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553187; PubChem:CID137377196
Local ready
Direct docking supported
E3L025851
BDB025851
BDBM553188
CN(C)[C@@H]1CCN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C28H29F4N5O3
559.564000
VGQSGFWDYVGYHX-GOSISDBHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553188; PubChem:CID138541599
Local ready
Direct docking supported
E3L025852
BDB025852
BDBM553189
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C28H30F4N6O3
574.579000
FWPLJWKZTKPODG-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553189; PubChem:CID138551577
Local ready
Direct docking supported
E3L025853
BDB025853
BDBM553190
CC(C)Oc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)cn1
C26H28F4N6O3
548.541000
WIXUURNYZMIRQL-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553190; PubChem:CID138551426
Local ready
Direct docking supported
E3L025854
BDB025854
BDBM553191
C[C@H]1CN(c2cc(F)c(-c3cnc4c(c3)OCCO4)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C26H25F4N5O4
547.509000
TUBYFMDAMSFKHJ-AWEZNQCLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553191; PubChem:CID138551530
Local ready
Direct docking supported
E3L025855
BDB025855
BDBM553192
C[C@@H]1CN(c2cc(F)c(C3=CCN(C4CCN(C)CC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H40F4N6O2
604.693000
OOSIKBBJRCLNGC-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553192
Local ready
Direct docking supported
E3L025856
BDB025856
BDBM553193
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)C(C)(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H37F4N5O3
591.650000
YUQQTRQGHMFPCS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553193
Local ready
Direct docking supported
E3L025857
BDB025857
BDBM553194
C[C@@H]1CN(c2cc(F)c(C3CCN(C(=O)C(C)(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H39F4N5O3
593.666000
IHCMMKWLEGMURM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553194; PubChem:CID137377195
Local ready
Direct docking supported
E3L025858
BDB025858
BDBM553195
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncccn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F4N7O2
585.606000
DEBZIPSPVQFUFB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553195
Local ready
Direct docking supported
E3L025859
BDB025859
US11319299, Example 246
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H37F4N7O3
631.675000
XVAVYLGVIGIDHZ-FGYAAKKASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553196; PubChem:CID138541749
Local ready
Direct docking supported
E3L025860
BDB025860
US11319299, Example 247
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H34F5N5O3
619.635000
VQYRENMNLMEHOT-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553197; PubChem:CID137377839
Local ready
Direct docking supported