E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025861
BDB025861
US11319299, Example 248
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F5N6O2
590.597000
OVAUTHLIMOXPHS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553198; PubChem:CID137376865
Local ready
Direct docking supported
E3L025862
BDB025862
BDBM553199
C[C@@H]1CN(c2cc(F)c(C3=CCN(S(C)(=O)=O)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H29F4N5O4S
571.597000
FKVVHGMBHWDBIC-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553199; PubChem:CID137376727
Local ready
Direct docking supported
E3L025863
BDB025863
US11319299, Example 250
C[C@@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2cc(Cl)cc(Cl)c2)C[C@H](C)N1C
C29H31Cl2FN4O2
557.497000
QMZXXQAFWAEJII-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553200; PubChem:CID137376882
Local ready
Direct docking supported
E3L025864
BDB025864
US11319299, Example 251
C[C@@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2ccc(F)cc2Cl)C[C@H](C)N1C
C29H31ClF2N4O2
541.042000
MIMHFISDRAEPDG-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553201; PubChem:CID137376846
Local ready
Direct docking supported
E3L025865
BDB025865
BDBM553202
CC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C27H31F4N5O3
549.569000
LCXJMPMOALOSJV-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553202; PubChem:CID137376827
Local ready
Direct docking supported
E3L025866
BDB025866
BDBM553203
CCOC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C28H33F4N5O4
579.595000
PEUVXWXULQYIMV-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553203
Local ready
Direct docking supported
E3L025867
BDB025867
BDBM553204
CC(C)COC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C30H37F4N5O4
607.649000
ASOBWOCSFRBVAK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553204
Local ready
Direct docking supported
E3L025868
BDB025868
BDBM553205
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)CC(C)(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H39F4N5O3
605.677000
CENRBKKAUQNMQM-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553205
Local ready
Direct docking supported
E3L025869
BDB025869
BDBM553206
C[C@@H]1CN(c2cc(F)c(C3CCN(C(=O)CC(C)(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H41F4N5O3
607.693000
OURQFEDQCWPZPL-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553206; PubChem:CID137376961
Local ready
Direct docking supported
E3L025870
BDB025870
BDBM553207
C[C@@H]1CN(c2cc(F)c(-c3ccc(F)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H24F5N5O2
521.490000
VSCKQMDULQRXSY-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553207; PubChem:CID137377057
Local ready
Direct docking supported
E3L025871
BDB025871
BDBM553208
CN(C)C1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H31F4N7O3
589.594000
GGBCIXPYULSFCI-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553208; PubChem:CID137376958
Local ready
Direct docking supported
E3L025872
BDB025872
BDBM553209
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O2
572.607000
FKDSUSOZDDZFCR-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553209; PubChem:CID138541722
Local ready
Direct docking supported
E3L025873
BDB025873
US11319299, Example 264
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)c(Cl)c2)C[C@H](C)N1C
C28H31ClF2N6O2
557.045000
NBSSZEPXMIZXLI-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553210; PubChem:CID138541695
Local ready
Direct docking supported
E3L025874
BDB025874
US11319299, Example 265
COc1cc(Cl)cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1
C29H34ClFN6O3
569.081000
PUAAPKUZSJEOAK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553211; PubChem:CID137376793
Local ready
Direct docking supported
E3L025875
BDB025875
US11319299, Example 266
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)c(Cl)c2F)C[C@H](C)N1C
C28H30ClF3N6O2
575.035000
DKZXWCHZCVJVON-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553212; PubChem:CID137377249
Local ready
Direct docking supported
E3L025876
BDB025876
BDBM553213
C[C@@H]1CN(c2cc(F)c(C3=CCN(C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H31F4N5O2
521.559000
MKXKKFODVLYGMD-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553213; PubChem:CID137376939
Local ready
Direct docking supported
E3L025877
BDB025877
BDBM553214
Cc1cc(C#N)ncc1-c1cc(NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)c(N2C[C@@H](C)N(C)[C@@H](C)C2)cc1F
C27H26F4N6O2
542.537000
PDQNPSGFIRDJOP-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553214; PubChem:CID137377267
Local ready
Direct docking supported
E3L025878
BDB025878
BDBM553215
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ccccn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H32F4N6O2
584.618000
NUJQYLHTFQKNEI-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553215; PubChem:CID137377224
Local ready
Direct docking supported
E3L025879
BDB025879
BDBM553216
Cc1cnc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)nc1
C30H33F4N7O2
599.633000
CWUNRZBCKFRSHF-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553216
Local ready
Direct docking supported
E3L025880
BDB025880
BDBM553217
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H36F4N6O3
616.660000
DPEXOXOGNQYBMV-FGYAAKKASA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553217
Local ready
Direct docking supported