E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025821
BDB025821
BDBM553158
C[C@@H]1CN(c2cc(F)c(-c3cccnc3OC3CCCCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
JKJQBQAEZJXXTJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553158; PubChem:CID137377192
Local ready
Direct docking supported
E3L025822
BDB025822
BDBM553159
COc1ccc(CC(=O)N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)cc1
C34H37F4N5O4
655.693000
BMXHILGZPVKATJ-OYRHEFFESA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553159
Local ready
Direct docking supported
E3L025823
BDB025823
US11319299, Example 209
COCCOc1ccc(-c2cc(NC(=O)c3cn(C)c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cn1
C29H33F4N5O4
591.606000
QZBGZIATYPDSKW-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553160; PubChem:CID137376753
Local ready
Direct docking supported
E3L025824
BDB025824
US11319299, Example 210
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O2
587.622000
ILEXXYIMBZHJIB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553161; PubChem:CID138542386
Local ready
Direct docking supported
E3L025825
BDB025825
US11319299, Example 211
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2sccc2C(F)(F)F)C[C@H](C)N1C
C27H30F4N6O2S
578.636000
BTCHLURQMWRZGT-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553162; PubChem:CID138541910
Local ready
Direct docking supported
E3L025826
BDB025826
US11319299, Example 212
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(Cl)c(F)c(Cl)c2)C[C@H](C)N1C
C28H30Cl2F2N6O2
591.490000
LNCJRCRMVZXUPY-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553163; PubChem:CID137377324
Local ready
Direct docking supported
E3L025827
BDB025827
US11319299, Example 213
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(Cl)c2Cl)C[C@H](C)N1C
C28H31Cl2FN6O2
573.500000
RWAPXLQUONTCET-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553164; PubChem:CID137377409
Local ready
Direct docking supported
E3L025828
BDB025828
BDBM553165
C[C@H]1CN(c2cc(F)c(-c3cccc(CN(C)C4COC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
LTQXGOCPTJAGHW-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553165; PubChem:CID138551549
Local ready
Direct docking supported
E3L025829
BDB025829
BDBM553166
CCOc1cncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)c1
C27H29F4N5O3
547.553000
QMIBMBMTSPIUOM-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553166; PubChem:CID137376922
Local ready
Direct docking supported
E3L025830
BDB025830
US11319299, Example 216
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)CCN1C
C28H32F3N7O3
571.604000
MAMCQIDNEWXMCJ-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553167; PubChem:CID138542416
Local ready
Direct docking supported
E3L025831
BDB025831
US11319299, Example 217
CC(=O)Nc1ccc(-c2cc(NC(=O)c3cn(C)c(=O)cc3C(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)cn1
C27H29F3N6O3
542.562000
UOYZNLPMXQNDOB-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553168; PubChem:CID138551533
Local ready
Direct docking supported
E3L025832
BDB025832
US11319299, Example 218
C[C@H]1CN(c2cc(F)c(-c3cnc(C#N)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)CCN1C
C25H24F3N7O2
511.508000
DJHAAPZISXGUQE-AWEZNQCLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553169; PubChem:CID138551570
Local ready
Direct docking supported
E3L025833
BDB025833
BDBM553170
C[C@H]1CN(c2cc(F)c(-c3ccc(N(C)C)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C26H28F4N6O2
532.542000
IIEPJVUSOQMPQO-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553170; PubChem:CID138551331
Local ready
Direct docking supported
E3L025834
BDB025834
BDBM553171
C[C@@H]1CN(c2cc(F)c(-c3cnc(N(C)C)c(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H29F4N7O2
571.579000
BKESNHWUAMWCBS-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553171; PubChem:CID137376964
Local ready
Direct docking supported
E3L025835
BDB025835
BDBM553172
C[C@@H]1CN(c2cc(F)c(-c3cnc(N(C)C)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H29F5N6O2
564.559000
RKSJMSGPLNRSAF-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553172; PubChem:CID137376771
Local ready
Direct docking supported
E3L025836
BDB025836
BDBM553173
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)c(Cl)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H31ClF4N6O3
623.051000
KRAIIUDIVNUZMW-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553173; PubChem:CID137376909
Local ready
Direct docking supported
E3L025837
BDB025837
BDBM553174
C[C@@H]1CN(c2cc(F)c(-c3cnc4c(c3)OCCO4)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H27F4N5O4
561.536000
BDXTXFAMPZUTJT-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553174; PubChem:CID137377082
Local ready
Direct docking supported
E3L025838
BDB025838
BDBM553175
CN1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1(C)C
C28H31F4N7O3
589.594000
NAQVVLMOXKGZLS-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553175; PubChem:CID137376985
Local ready
Direct docking supported
E3L025839
BDB025839
US11319299, Example 226
C[C@@H]1CN(c2cc(F)c(-c3ccnc(N4CCOCC4)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3
602.633000
YFXIMBDAHSTROL-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553176; PubChem:CID138541773
Local ready
Direct docking supported
E3L025840
BDB025840
US11319299, Example 227
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCCC4)cc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O2
585.646000
ZCDKHBWFAXURNQ-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553177; PubChem:CID138541686
Local ready
Direct docking supported