E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026041
BDB026041
US11319299, Example 455
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCN(C5CC5)CC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C31H36F4N8O2
628.675000
LBKYZVYBTXXVCT-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553380; PubChem:CID138551423
Local ready
Direct docking supported
E3L026042
BDB026042
US11319299, Example 456
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H31F5N6O2
590.597000
ICWHVNWEWUCKRA-ZWKOTPCHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553381; PubChem:CID137376763
Local ready
Direct docking supported
E3L026043
BDB026043
BDBM553382
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN(C)C)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F4N8O2
628.675000
JNWFGJPCNHAOCK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553382
Local ready
Direct docking supported
E3L026044
BDB026044
BDBM553383
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN5CCOCC5)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H38F4N8O3
670.712000
NTSPCKJLOIPKCN-OYRHEFFESA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553383
Local ready
Direct docking supported
E3L026045
BDB026045
BDBM553384
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ncc(CN5CCN(C)CC5)cn4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C34H41F4N9O2
683.755000
GCAJSFYNPPJKIJ-SZPZYZBQSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553384
Local ready
Direct docking supported
E3L026046
BDB026046
US11319299, Example 460
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H34F3N7O3
585.631000
YVMPDRKPFAFZNO-ZWKOTPCHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553385; PubChem:CID137376736
Local ready
Direct docking supported
E3L026047
BDB026047
US11319299, Example 461
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CCO1
C30H36F3N7O3
599.658000
OCXIOXDNHHZKMM-CEXWTWQISA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553386; PubChem:CID137377251
Local ready
Direct docking supported
E3L026048
BDB026048
US11319299, Example 462
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H38F3N7O3
613.685000
UPMSAXBMORZPKO-FGYAAKKASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553387; PubChem:CID138541778
Local ready
Direct docking supported
E3L026049
BDB026049
BDBM553388
O=C(Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1C[C@@H]2CCN[C@@H]2C1)c1c[nH]c(=O)cc1C(F)(F)F
C27H27F4N7O3
573.551000
VSEFXESDWRVNJA-OYHNWAKOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553388
Local ready
Direct docking supported
E3L026050
BDB026050
US11319299, Example 464
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCNCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C28H32F4N8O2
588.610000
HNFLATTUKOKKPM-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553389; PubChem:CID138551480
Local ready
Direct docking supported
E3L026051
BDB026051
US11319299, Example 465
CC(C)N1CCN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CC1
C31H36F5N7O
617.667000
RWLKJZIFMVGSSG-FQEVSTJZSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553390; PubChem:CID138551335
Local ready
Direct docking supported
E3L026052
BDB026052
US11319299, Example 466
CC(C)N1CCN(c2ncc(-c3cc(NC(=O)c4ccc(F)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CC1
C32H38F5N7O
631.694000
RCUDLUQSPHPFBA-OYRHEFFESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553391; PubChem:CID137376735
Local ready
Direct docking supported
E3L026053
BDB026053
US11319299, Example 467
CC(C)N1CCN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CC1
C31H38F4N8O2
630.691000
PNNXHDIJLRCCHS-FQEVSTJZSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553392; PubChem:CID138551582
Local ready
Direct docking supported
E3L026054
BDB026054
BDBM553393
C[C@@H]1COCCN1c1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)cn1
C28H31F4N7O3
589.594000
HEVWPLPEWXVHTO-DLBZAZTESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553393; PubChem:CID138541754
Local ready
Direct docking supported
E3L026055
BDB026055
BDBM553394
C[C@@H]1COCCN1c1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cn1
C29H33F4N7O3
603.621000
MAPJEMQJSFQSHZ-FGTMMUONSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553394
Local ready
Direct docking supported
E3L026056
BDB026056
BDBM553395
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)CCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H37F4N5O4
619.660000
OKLXQOPLMSPONH-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553395
Local ready
Direct docking supported
E3L026057
BDB026057
BDBM553396
C[C@@H]1CN(c2cc(F)c(C3=CCCN(C(=O)OC4(C)CCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H37F4N5O4
619.660000
SCCRHWUDAVJYCW-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553396
Local ready
Direct docking supported
E3L026058
BDB026058
BDBM553397
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)CCC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N5O4
605.633000
IBJJWBJQAZQVSN-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553397
Local ready
Direct docking supported
E3L026059
BDB026059
BDBM553398
C[C@@H]1CN(c2cc(F)c(-c3cccc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3
588.606000
WQOBXJUCQHZCAA-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553398; PubChem:CID138541661
Local ready
Direct docking supported
E3L026060
BDB026060
BDBM553399
C[C@@H]1CN(c2cc(F)c(-c3cncc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H31F4N7O3
589.594000
GBDDOVRISQQPLW-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553399; PubChem:CID137377346
Local ready
Direct docking supported