E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026081
BDB026081
BDBM553421
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)NCC4CC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O3S
606.646000
TYULUCOCVYAPKR-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553421
Local ready
Direct docking supported
E3L026082
BDB026082
BDBM553422
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)N(C)CC4CC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3S
620.673000
MGQZDUMAZNILGM-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553422
Local ready
Direct docking supported
E3L026083
BDB026083
BDBM553423
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)NC4CCCCC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3S
634.700000
NLQDKMRAOZJVCF-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553423; PubChem:CID138541631
Local ready
Direct docking supported
E3L026084
BDB026084
BDBM553424
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)N(C)C4CCCCC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F4N6O3S
648.727000
LYYCISKTVJXSEH-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553424
Local ready
Direct docking supported
E3L026085
BDB026085
BDBM553425
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)N4CCOCC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O4S
622.645000
LTNYVUGUYWIGTP-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553425; PubChem:CID137377239
Local ready
Direct docking supported
E3L026086
BDB026086
BDBM553426
C[C@@H]1CN(c2cc(F)c(-c3ncc(C(=O)N4CCN(C)CC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3S
635.688000
GCXFLWNHVAKGJY-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553426
Local ready
Direct docking supported
E3L026087
BDB026087
US11319299, Example 502
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(N)c(F)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F5N7O2
605.612000
RDYGVKWQXOWEFO-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553427; PubChem:CID138541753
Local ready
Direct docking supported
E3L026088
BDB026088
BDBM553428
C[C@@H]1CN(c2cc(F)c(C3=CCN(c4ccc(C5CC5)nn4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H35F4N7O2
625.671000
VOKYGXLFDOYEOE-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553428
Local ready
Direct docking supported
E3L026089
BDB026089
BDBM553429
CCc1ccc(N2CC=C(c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)CC2)nn1
C31H35F4N7O2
613.660000
SVGMCSCHSXDPGW-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553429
Local ready
Direct docking supported
E3L026090
BDB026090
US11319299, Example 506
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)cn1
C29H33F4N7O3
603.621000
NSMLWLULIDTGPK-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553430; PubChem:CID138541755
Local ready
Direct docking supported
E3L026091
BDB026091
BDBM553431
C[C@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H33F3N6O3
570.616000
PDUSQEXPSXKZTM-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553431; PubChem:CID138542132
Local ready
Direct docking supported
E3L026092
BDB026092
BDBM553432
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)CCO1
C30H35F3N6O3
584.643000
IHMQKMXIOLIHGG-CEXWTWQISA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553432; PubChem:CID138541834
Local ready
Direct docking supported
E3L026093
BDB026093
BDBM553433
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H33F3N6O3
570.616000
PDUSQEXPSXKZTM-ZWKOTPCHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553433; PubChem:CID138541726
Local ready
Direct docking supported
E3L026094
BDB026094
BDBM553434
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCO[C@@H](C)C4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C30H35F3N6O3
584.643000
IHMQKMXIOLIHGG-OTWHNJEPSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553434; PubChem:CID138542202
Local ready
Direct docking supported
E3L026095
BDB026095
BDBM553435
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4C[C@@H](C)N(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H37F3N6O3
598.670000
BUMOICXGLLMHCG-FGYAAKKASA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553435
Local ready
Direct docking supported
E3L026096
BDB026096
US11319299, Example 512
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(N)c(F)cc2C(F)(F)F)CCN1C
C28H30F5N7O2
591.585000
QTUYXFOWBHITSC-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553436; PubChem:CID138551581
Local ready
Direct docking supported
E3L026097
BDB026097
BDBM553437
CCN1CC[C@H]2CN(c3cc(F)c(-c4cnc(N5CCOCC5)nc4)cc3NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)C[C@H]21
C29H31F4N7O3
601.605000
RSSCCEREASOCQQ-SSOJOUAXSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553437
Local ready
Direct docking supported
E3L026098
BDB026098
BDBM553438
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C30H35F3N6O3
584.643000
HWUPKHRPPLFJJI-GBESFXJTSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553438; PubChem:CID137377533
Local ready
Direct docking supported
E3L026099
BDB026099
US11319299, Example 515
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C31H37F3N6O3
598.670000
BQVIODKCWLYNLR-SLFFLAALSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553439; PubChem:CID138541701
Local ready
Direct docking supported
E3L026100
BDB026100
US11319299, Example 516
C[C@@H]1CN(c2ccc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C30H35F3N6O3
584.643000
GUMGGQGWDFBAJZ-RBUKOAKNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553440; PubChem:CID137377171
Local ready
Direct docking supported