E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026761
BDB026761
US11407721, Example 49
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2cccc(C#N)c2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H26Cl2N2O4
537.443000
SPYIFURQACUIAM-RAVGUYNFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562802; PubChem:CID86282599
Local ready
Direct docking supported
E3L026762
BDB026762
US11407721, Example 50
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2cccc(S(C)(=O)=O)c2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H29Cl2NO6S
590.525000
LSNLEJWOTADEBZ-RAVGUYNFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562803; PubChem:CID86282467
Local ready
Direct docking supported
E3L026763
BDB026763
US11407721, Example 51
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccccc2S(C)(=O)=O)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H29Cl2NO6S
590.525000
PEUMHKJNNDMFQQ-PTJMHOJZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562804; PubChem:CID86282739
Local ready
Direct docking supported
E3L026764
BDB026764
US11407721, Example 52
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccc(F)cc2S(C)(=O)=O)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H28Cl2FNO6S
608.515000
IVUMCPDLSMRPHW-PTJMHOJZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562805; PubChem:CID86282740
Local ready
Direct docking supported
E3L026765
BDB026765
US11407721, Example 53
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccc(S(C)(=O)=O)c(F)c2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H28Cl2FNO6S
608.515000
AHQBKWGBBRACRW-PTJMHOJZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562806; PubChem:CID86282741
Local ready
Direct docking supported
E3L026766
BDB026766
US11407721, Example 54
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccc(S(C)(=O)=O)cc2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H29Cl2NO6S
590.525000
SOTSYTXAFGARSV-RAVGUYNFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562807; PubChem:CID86282742
Local ready
Direct docking supported
E3L026767
BDB026767
US11407721, Example 55
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccc(S(C)(=O)=O)cc2C#N)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C30H28Cl2N2O6S
615.535000
WEBCGFZJJBTPNT-GCFVYEKYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562808; PubChem:CID90371903
Local ready
Direct docking supported
E3L026768
BDB026768
US11407721, Example 56
CCC[C@H](C(=O)O)N1C(=O)[C@H](Cc2ccc(S(=O)(=O)C(F)(F)F)cc2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C29H26Cl2F3NO6S
644.495000
YVJUKVSHQAHNBQ-ZJSPYRCASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562809; PubChem:CID86280698
Local ready
Direct docking supported
E3L026769
BDB026769
US11407721, Example 57
CCC[C@H](C(=O)O)N1C(=O)[C@H](CCCN2CCOCC2)O[C@@H](c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C28H34Cl2N2O5
549.495000
NGKDSMRXYILHBJ-ZJSPYRCASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562810; PubChem:CID86280699
Local ready
Direct docking supported
E3L026770
BDB026770
US11407721, Example 58
O=C1[C@@H](Cc2ccc(F)cc2)O[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1c1ccnc(Cl)c1
C28H20Cl3FN2O2
541.837000
KDMZQPXBRXKOKS-FXVJXKIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562811; PubChem:CID86280701
Local ready
Direct docking supported
E3L026771
BDB026771
US11407721, Example 59
O=C1[C@@H](Cc2ccc(F)cc2)O[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1c1cccnc1
C28H21Cl2FN2O2
507.392000
NKGNWIMUMHTIQK-KWXIBIRDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562812; PubChem:CID165414772
Local ready
Direct docking supported
E3L026772
BDB026772
US11407721, Example 60
O=C1[C@@H](Cc2ccc(F)cc2)O[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1c1cn[nH]c1
C26H20Cl2FN3O2
496.369000
GAQCTUBQELXKFM-DSNGMDLFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562813; PubChem:CID118623002
Local ready
Direct docking supported
E3L026773
BDB026773
US11407721, Example 61
O=C1[C@@H](Cc2ccc(F)cc2)O[C@H](c2ccc(Cl)cc2)[C@H](c2ccc(Cl)cc2)N1c1ccncc1
C28H21Cl2FN2O2
507.392000
VPGKHHKAWPXNLG-KWXIBIRDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562814; PubChem:CID90357020
Local ready
Direct docking supported
E3L026774
BDB026774
US11407721, Example 62
CS(=O)(=O)c1ccc(C[C@H]2O[C@H](c3ccc(Cl)cc3)C(c3ccc(Cl)cc3)N(c3cccnc3)C2=O)cc1
C29H24Cl2N2O4S
567.494000
ZOHISOPDHUSNHZ-QBYFTLAFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562815; PubChem:CID159929572
Local ready
Direct docking supported
E3L026775
BDB026775
US11407721, Example 63
CS(=O)(=O)c1ccc(C[C@H]2O[C@H](c3ccc(Cl)cc3)C(c3ccc(Cl)cc3)N(c3cccnc3)C2=O)c(F)c1
C29H23Cl2FN2O4S
585.484000
FPKXWYRDEQIPKH-QBYFTLAFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562816; PubChem:CID158387004
Local ready
Direct docking supported
E3L026776
BDB026776
US11407721, Example 64
CN1CCN(C(=O)C[C@H]2O[C@H](c3cccc(Cl)c3)[C@H](c3ccc(Cl)cc3)N(CC3CC3)C2=O)CC1
C27H31Cl2N3O3
516.469000
DMOPFPDBKUOWQW-DMTNHVFBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562817; PubChem:CID118622876
Local ready
Direct docking supported
E3L026777
BDB026777
US11407721, Example 65
CCC[C@@H](C(N)=O)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@@H]1c1ccc(Cl)cc1
C23H24Cl2N2O5
479.360000
QDILNQYTSNQECW-IZZBFERCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562818; PubChem:CID90356899
Local ready
Direct docking supported
E3L026778
BDB026778
US11407721, Example 66
CCCC(C#N)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@@H]1c1ccc(Cl)cc1
C23H22Cl2N2O4
461.345000
XKUYNNZACAGYEX-LMSKBGPXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562819; PubChem:CID137355924
Local ready
Direct docking supported
E3L026779
BDB026779
US11407721, Example 67
CCC[C@H](c1nnn[nH]1)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@@H]1c1ccc(Cl)cc1
C23H23Cl2N5O4
504.374000
AXLFRXXLVUJAFX-RMVXJAJNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562820; PubChem:CID118622847
Local ready
Direct docking supported
E3L026780
BDB026780
US11407721, Example 68
CCC[C@H](c1nnc(C)o1)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@@H]1c1ccc(Cl)cc1
C25H25Cl2N3O5
518.397000
PPGOVTZCALBESV-YXPKMTABSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM562821; PubChem:CID118622849
Local ready
Direct docking supported