E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030721
BDB030721
BDBM617716
Cc1cc(Cl)c(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)cc1[N+](=O)[O-]
C29H36ClN9O5
626.118000
ADPABPAHYGKFJP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617716; PubChem:CID168679446
Local ready
Direct docking supported
E3L030722
BDB030722
BDBM617717
Cc1cc(Cl)c(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)ccc2N2CCN(C)CC2)cc1N
C29H38ClN9O3
596.136000
ZONSPNCYDNWELU-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617717; PubChem:CID168679447
Local ready
Direct docking supported
E3L030723
BDB030723
BDBM617718
C[C@H]1CN(c2cc(F)c(-n3cc(C(=O)N4CCN(C)CC4)nn3)cc2NC(=O)c2cnc(Cl)cc2C(F)(F)F)C[C@H](C)N1C
C28H32ClF4N9O2
638.070000
HQKNQELAKYWNBJ-IRXDYDNUSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617718
Local ready
Direct docking supported
E3L030724
BDB030724
BDBM617719
C[C@@H]1CN(c2cc(F)c(-n3cc(C(=O)N4CCN(C)CC4)nn3)cc2NC(=O)c2cnc(Cl)cc2C(F)(F)F)C[C@H](C)N1C
C28H32ClF4N9O2
638.070000
HQKNQELAKYWNBJ-CALCHBBNSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617719
Local ready
Direct docking supported
E3L030725
BDB030725
BDBM617720
C[C@@H]1CN(c2cc(F)c(-n3cc(C(=O)NC4CCN(C)CC4)nn3)cc2NC(=O)c2cnc(Cl)cc2C(F)(F)F)C[C@H](C)N1C
C29H34ClF4N9O2
652.097000
FCCPXOWAQXAKOZ-CALCHBBNSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617720
Local ready
Direct docking supported
E3L030726
BDB030726
BDBM617721
CCN(CC)C(=O)c1cn(-c2cc(NC(=O)c3cnc(Cl)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)nn1
C27H31ClF4N8O2
611.044000
BJRKZXGOVMJDCT-IYBDPMFKSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617721; PubChem:CID168679451
Local ready
Direct docking supported
E3L030727
BDB030727
BDBM617722
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-n3cc(C(=O)NC4CCN(C)CC4)nn3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)cn1
C30H37F4N9O3
647.678000
OJILDGXLYZLAAJ-HDICACEKSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617722
Local ready
Direct docking supported
E3L030728
BDB030728
BDBM617723
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-n3cc(C(=O)CCCCN4CCOCC4)nn3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)cn1
C32H40F4N8O4
676.716000
RBHZXDGAPNPFCH-OYRHEFFESA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617723; PubChem:CID168679453
Local ready
Direct docking supported
E3L030729
BDB030729
BDBM617724
CCN(CC)C(=O)c1cn(-c2cc(NC(=O)c3cnc(Cl)cc3Cl)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)nn1
C26H31Cl2FN8O2
577.492000
JFILSKSOHNRHME-IYBDPMFKSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617724; PubChem:CID168679454
Local ready
Direct docking supported
E3L030730
BDB030730
BDBM617725
C[C@@H]1CN(c2cc(F)c(-n3cc(C(=O)N4CCN(C)CC4)nn3)cc2NC(=O)c2cnc(Cl)cc2Cl)C[C@H](C)N1C
C27H32Cl2FN9O2
604.518000
FZCFEISTOWWIFX-CALCHBBNSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617725; PubChem:CID168679455
Local ready
Direct docking supported
E3L030731
BDB030731
BDBM617726
C[C@@H]1CN(c2cc(F)c(-n3cc(C(=O)NC4CCN(C)CC4)nn3)cc2NC(=O)c2cnc(C(F)(F)F)cc2Cl)C[C@H](C)N1C
C29H34ClF4N9O2
652.097000
BRPOVQYFLPLBLI-CALCHBBNSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM617726
Local ready
Direct docking supported
E3L030732
BDB030732
BDBM617727
Cc1c(Cl)ncc(C(=O)Nc2cc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1Cl
C30H38Cl2FN9O3
662.598000
QFNWYAQLZAKBSS-KDURUIRLSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM617727; PubChem:CID168679457
Local ready
Direct docking supported
E3L030733
BDB030733
US20230287003, Example 1c
CCC1CCOc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C21H20ClN5O2
409.877000
AIZFCBGYSFGUNU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618480; PubChem:CID146172016
Local ready
Direct docking supported
E3L030734
BDB030734
US20230287003, Example 1f
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C)(C)CCO2
C21H20ClN5O2
409.877000
QAZSANRJSRXQSW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618483; PubChem:CID146171909
Local ready
Direct docking supported
E3L030735
BDB030735
US20230287003, Example 1g
COCC1(C)CCOc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C22H22ClN5O3
439.903000
BSBYVRFVKLXBJR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618484; PubChem:CID146171935
Local ready
Direct docking supported
E3L030736
BDB030736
US20230287003, Example 1h
CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC1(C)C
C22H22ClN5O2
423.904000
PPADEHLCGUTNFC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618485; PubChem:CID146172123
Local ready
Direct docking supported
E3L030737
BDB030737
US20230287003, Example 1i
CC1Nc2c(c(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)OCC12CC2
C22H20ClN5O2
421.888000
CPRJDQUHIKJKEF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618486; PubChem:CID155758479
Local ready
Direct docking supported
E3L030738
BDB030738
US20230287003, Example 1k
CC1COc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C19H16ClN5O2
381.823000
OCOBDJHXJUVKDY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618488; PubChem:CID146191440
Local ready
Direct docking supported
E3L030739
BDB030739
US20230287003, Example 1l
CCC1COc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C20H18ClN5O2
395.850000
PMAQBDMELAPHBY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618489; PubChem:CID155758512
Local ready
Direct docking supported
E3L030740
BDB030740
US20230287003, Example 1m
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C1CC1)CO2
C21H18ClN5O2
407.861000
MFFMNWKZRBRBFW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618490; PubChem:CID155758514
Local ready
Direct docking supported