E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L030741
BDB030741
US20230287003, Example 1n
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C1CCC1)CO2
C22H20ClN5O2
421.888000
IYECHDVGEPQODK-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618491; PubChem:CID155758517
Local ready
Direct docking supported
E3L030742
BDB030742
US20230287003, Example 1o
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC1(CCOC1)CCO2
C22H20ClN5O3
437.887000
HPUBEZRVMQEQPV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618492; PubChem:CID155758460
Local ready
Direct docking supported
E3L030743
BDB030743
US20230287003, Example 1p
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C(F)F)CCO2
C20H16ClF2N5O2
431.830000
YQDCNZJTMIVISO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618493; PubChem:CID146171972
Local ready
Direct docking supported
E3L030744
BDB030744
US20230287003, Example 1q
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)NC(C1CC1)C(F)(F)CO2
C22H18ClF2N5O2
457.868000
NDXNRYJTYFEIAB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618494; PubChem:CID146171967
Local ready
Direct docking supported
E3L030745
BDB030745
US20230287003, Example 1r
C[C@@H]1CN(c2nc(Cl)c(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC[C@H](C4CC4)N3)n2)C[C@H](C)O1
C26H30Cl2N6O3
545.471000
LYSXIROOOIMFMO-QWQRMKEZSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618495; PubChem:CID146188995
Local ready
Direct docking supported
E3L030746
BDB030746
US20230287003, Example 1s
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)CCS2
C22H20ClN5OS
437.956000
FHNIONKUBJIVHW-MRXNPFEDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618496; PubChem:CID146188990
Local ready
Direct docking supported
E3L030747
BDB030747
US20230287003, Example 1t
CC1CSc2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc3n(C)c2=O)N1
C19H16ClN5OS
397.891000
ADFUPSFQIKWUEZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618497; PubChem:CID155758508
Local ready
Direct docking supported
E3L030748
BDB030748
US20230287003, Example 1u
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)CCS2(=O)=O
C22H20ClN5O3S
469.954000
YJJKIWKERCXMSV-MRXNPFEDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618498; PubChem:CID146189136
Local ready
Direct docking supported
E3L030749
BDB030749
US20230287003, Example 2a
C[C@H]1CCOc2c(c3cc(Nc4cc(C(=O)O)nc(Cl)c4C#N)ccc3n(C)c2=O)N1
C21H18ClN5O4
439.859000
MOACILPHMHIEBM-JTQLQIEISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618500; PubChem:CID146171977
Local ready
Direct docking supported
E3L030750
BDB030750
US20230287003, Example 2b
Cn1c(=O)c2c(c3cc(Nc4nc(C(=O)O)nc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)CCO2
C22H19ClN6O4
466.885000
MFBJOSKJQIUZBW-CQSZACIVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618501; PubChem:CID156446617
Local ready
Direct docking supported
E3L030751
BDB030751
US20230287003, Example 3a
C[C@H]1CCOc2c(c3cc(Nc4cc(C(=O)N5CCC5)nc(Cl)c4C#N)ccc3n(C)c2=O)N1
C24H23ClN6O3
478.940000
QTOJOVHQDWPBEI-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618502; PubChem:CID146171968
Local ready
Direct docking supported
E3L030752
BDB030752
US20230287003, Example 3b
Cn1c(=O)c2c(c3cc(Nc4cc(C(=O)N5CC(C(F)(F)F)C5)nc(Cl)c4C#N)ccc31)N[C@@H](C1CC1)CCO2
C27H24ClF3N6O3
572.975000
NKJJHCGLAJYEPZ-GOSISDBHSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618503; PubChem:CID146188769
Local ready
Direct docking supported
E3L030753
BDB030753
US20230287003, Example 4a
C[C@H]1CCOc2c(c3cc(Nc4ccnc(Cl)c4Cl)ccc3n(C)c2=O)N1
C19H18Cl2N4O2
405.285000
UBJABJQSLUJCGN-JTQLQIEISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618504; PubChem:CID146172026
Local ready
Direct docking supported
E3L030754
BDB030754
US20230287003, Example 4b
COC[C@@H]1CCCN1C(=O)c1cc(Nc2ccc3c(c2)c2c(c(=O)n3C)OCC[C@H](C)N2)c(Cl)cn1
C26H30ClN5O4
512.010000
DVAMLSVSQRVFON-RDJZCZTQSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618505; PubChem:CID146191445
Local ready
Direct docking supported
E3L030755
BDB030755
US20230287003, Example 4c
Cn1c(=O)c2c(c3cc(Nc4ccnc(Cl)c4Cl)ccc31)N[C@@H](C1CC1)CCO2
C21H20Cl2N4O2
431.323000
VGGMRKDZUASPTK-CQSZACIVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618506; PubChem:CID146191441
Local ready
Direct docking supported
E3L030756
BDB030756
US20230287003, Example 4d
Cn1c(=O)c2c(c3cc(Nc4ccncc4Cl)ccc31)N[C@@H](C1CC1)C(F)(F)CO2
C21H19ClF2N4O2
432.858000
FPMMRNJSPJNIBE-IBGZPJMESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618507; PubChem:CID146191444
Local ready
Direct docking supported
E3L030757
BDB030757
US20230287003, Example 5a
Cn1c(=O)c2c(c3cc(Nc4nc(-n5ccc(C(F)(F)F)n5)ncc4Cl)ccc31)N[C@@H](C1CC1)CCO2
C24H21ClF3N7O2
531.926000
LJOMKTQOWUJNTH-MRXNPFEDSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618508; PubChem:CID146188992
Local ready
Direct docking supported
E3L030758
BDB030758
US20230287003, Example 5b
COCC1(C)CCOc2c(c3cc(Nc4nc(-n5ccc(C(F)(F)F)n5)ncc4Cl)ccc3n(C)c2=O)N1
C24H23ClF3N7O3
549.941000
LFUMMXUIWDXRKJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618509; PubChem:CID155758468
Local ready
Direct docking supported
E3L030759
BDB030759
US20230287003, Example 5c
C[C@H]1CCOc2c(c3cc(Nc4nc(-n5ccc(C(F)(F)F)n5)ncc4Cl)ccc3n(C)c2=O)N1
C22H19ClF3N7O2
505.888000
CAGMUBUQVMFVNL-NSHDSACASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618510; PubChem:CID146188918
Local ready
Direct docking supported
E3L030760
BDB030760
US20230287003, Example 5d
C[C@H]1CCOc2c(c3cc(Nc4nc(N5CCC(C(=O)N(C)C)CC5)ncc4Cl)ccc3n(C)c2=O)N1
C26H32ClN7O3
526.041000
QCUPYMGPYYDREU-HNNXBMFYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM618511; PubChem:CID146188919
Local ready
Direct docking supported