E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034261
BDB034261
US20240246935, Example 131
O=C1CCC(N2Cc3cc(O[C@H]4CCCCC[C@@H]4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C29H33N3O4
487.600000
GLHKSXCVDBGDKA-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686551; PubChem:CID166468965
Local ready
Direct docking supported
E3L034262
BDB034262
US20240246935, Example 132
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccc(O)cc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O5
489.572000
GNHKDBNLMXCZMH-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686552; PubChem:CID166469017
Local ready
Direct docking supported
E3L034263
BDB034263
US20240246935, Example 133
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccccc5O)C4)ccc3C2=O)C(=O)N1
C28H31N3O5
489.572000
XSHQABUUNPVCCA-MFXHTCIWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686553; PubChem:CID166468893
Local ready
Direct docking supported
E3L034264
BDB034264
US20240246935, Example 134
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5cccc(O)c5)C4)ccc3C2=O)C(=O)N1
C28H31N3O5
489.572000
HOOUEZZAUDFDOC-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686554; PubChem:CID166469002
Local ready
Direct docking supported
E3L034265
BDB034265
BDBM688094
FC(F)(F)c1cccc(-c2cc3nccc(NCCCNCc4ccco4)c3cc2C(F)(F)F)c1
C25H21F6N3O
493.451000
MMAVWJGNDKIHEB-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688094; PubChem:CID172430004
Local ready
Direct docking supported
E3L034266
BDB034266
BDBM688095
CC(C)(C)c1ccc(-c2ccc3c(NCCCNCc4ccco4)ccnc3c2)cc1
C27H31N3O
413.565000
BTYZMPAEBZOXIM-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688095; PubChem:CID56594484
Local ready
Direct docking supported
E3L034267
BDB034267
BDBM688096
CCCN(CCCNc1ccnc2cc(Cl)ccc12)Cc1ccc2[nH]ccc2c1
C24H27ClN4
406.961000
ICDGSQAOGROKRG-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688096; PubChem:CID172057049
Local ready
Direct docking supported
E3L034268
BDB034268
BDBM688097
FC(F)(F)c1ccc(-c2ccc3c(NCCCNCc4ccco4)ccnc3c2)cc1
C24H22F3N3O
425.454000
QFDJUTNPVXUTOP-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688097; PubChem:CID56594483
Local ready
Direct docking supported
E3L034269
BDB034269
BDBM688098
Clc1ccc2c(NCCCNCc3ccc[nH]3)ccnc2c1
C17H19ClN4
314.820000
BEBOLDNNKYMEHF-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688098; PubChem:CID172057043
Local ready
Direct docking supported
E3L034270
BDB034270
BDBM688099
Clc1ccc2c(NCCCCN(Cc3ccccc3)Cc3ccc4[nH]ccc4c3)ccnc2c1
C29H29ClN4
469.032000
HJTJSAOLQNBWQU-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688099; PubChem:CID172057333
Local ready
Direct docking supported
E3L034271
BDB034271
BDBM688100
COC(=O)CCCCCNCCCNc1ccnc2cc(Cl)ccc12
C19H26ClN3O2
363.889000
HZPVANXGQCYPHD-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688100; PubChem:CID172430005
Local ready
Direct docking supported
E3L034272
BDB034272
BDBM688101
CC(C)(C)c1ccc(Oc2ccc3c(NCCCNCc4ccco4)ccnc3c2)cc1
C27H31N3O2
429.564000
VDHTZVVVJAZCQI-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688101; PubChem:CID56593954
Local ready
Direct docking supported
E3L034273
BDB034273
BDBM688102
c1ccc(Cc2ccc3c(NCCCNCc4ccco4)ccnc3c2)cc1
C24H25N3O
371.484000
RVJXPLUAWZIYGH-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688102; PubChem:CID56593823
Local ready
Direct docking supported
E3L034274
BDB034274
BDBM688103
FC(F)(F)c1ccc2c(NCCCNCc3ccc[nH]3)ccnc2c1
C18H19F3N4
348.372000
IWGIFZXHQIOQOD-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688103; PubChem:CID172056970
Local ready
Direct docking supported
E3L034275
BDB034275
BDBM688104
CCCN(CCCNc1ccnc2cc(C(F)(F)F)ccc12)Cc1ccc2[nH]ccc2c1
C25H27F3N4
440.513000
WAAGHTGIBKABMF-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688104; PubChem:CID172056976
Local ready
Direct docking supported
E3L034276
BDB034276
BDBM688105
Clc1cccc(Cl)c1Cc1ccc2c(NCCCNCc3ccco3)ccnc2c1
C24H23Cl2N3O
440.374000
LMQCRTWBXFUZIS-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688105; PubChem:CID172056974
Local ready
Direct docking supported
E3L034277
BDB034277
BDBM688106
Clc1ccc2c(NCCCN(Cc3ccccc3)Cc3ccc4[nH]ccc4c3)ccnc2c1
C28H27ClN4
455.005000
ZITUQOWORGAVPD-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688106; PubChem:CID172057260
Local ready
Direct docking supported
E3L034278
BDB034278
BDBM688107
c1coc(CNCCCNc2ccnc3cc(CC4CCCCC4)ccc23)c1
C24H31N3O
377.532000
LGDFOBHBLQKOKQ-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688107; PubChem:CID56594078
Local ready
Direct docking supported
E3L034279
BDB034279
BDBM688108
CCCCCCNCCCNc1ccnc2cc(C(F)(F)F)ccc12
C19H26F3N3
353.432000
KVPKDVBVBPYOPD-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688108; PubChem:CID172057398
Local ready
Direct docking supported
E3L034280
BDB034280
BDBM688109
COc1ccc(Oc2ccc3c(NCCCNCc4ccco4)ccnc3c2)cc1
C24H25N3O3
403.482000
BGDNFVNBVKOWAX-UHFFFAOYSA-N Q9HCI5 Melanoma-associated antigen E1
BindingDB, PubChem
BindingDB:BDBM688109; PubChem:CID56595007
Local ready
Direct docking supported