E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034221
BDB034221
US20240246935, Example 84
N#Cc1cc(Cl)ccc1C1CN([C@H]2CCC[C@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C28H27ClN4O4
519.001000
OXAOBLMMSKVSTA-QNRWSGHRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686505; PubChem:CID169030281
Local ready
Direct docking supported
E3L034222
BDB034222
US20240246935, Example 85
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCCC[C@@H]5N5CC(c6ccc(F)cc6Cl)C5)ccc4C3=O)CC1C2
C29H29ClFN3O4
538.019000
ZOHPDTMOHJGCRX-QGCWWAPOSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686506; PubChem:CID166469242
Local ready
Direct docking supported
E3L034223
BDB034223
US20240246935, Example 86
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCC[C@@H]5N5CC(c6ccc(F)cc6Cl)C5)ccc4C3=O)CC1C2
C28H27ClFN3O4
523.992000
HPNNYDLLFGBDLQ-QAMMTEFWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686507; PubChem:CID166469208
Local ready
Direct docking supported
E3L034224
BDB034224
US20240246935, Example 87
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCC[C@@H]5N5CC(c6cccc(F)c6)C5)ccc4C3=O)CC1C2
C28H28FN3O4
489.547000
VYZZCJGEWQSQBG-GGTKOGOXSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686508; PubChem:CID166469225
Local ready
Direct docking supported
E3L034225
BDB034225
US20240246935, Example 88
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CC(c5cccc(F)c5)C4)ccc3C2=O)C(=O)N1
C27H28FN3O4
477.536000
VFXCATJGAJYURP-OTKIHZFJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686509; PubChem:CID166469177
Local ready
Direct docking supported
E3L034226
BDB034226
US20240246935, Example 89
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCCC[C@@H]5N5CC(c6cccc(F)c6)C5)ccc4C3=O)CC1C2
C29H30FN3O4
503.574000
ZEQMCSZYRVXYQW-UQKARQJCSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686510; PubChem:CID166468901
Local ready
Direct docking supported
E3L034227
BDB034227
US20240246935, Example 90
N#Cc1ccc(C2CN([C@H]3CCCC[C@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)c(F)c1
C30H29FN4O4
528.584000
WGMQQYCYSPXKPN-QSMSFNOWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686511; PubChem:CID166469140
Local ready
Direct docking supported
E3L034228
BDB034228
US20240246935, Example 91
N#Cc1ccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)c(F)c1
C30H29FN4O4
528.584000
WGMQQYCYSPXKPN-CHZILUMDSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686512; PubChem:CID166469253
Local ready
Direct docking supported
E3L034229
BDB034229
US20240246935, Example 92
N#Cc1ccc(C2CN([C@H]3CCCC[C@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)cc1
C30H30N4O4
510.594000
QELICZDPXLIBGQ-URGSMFQNSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686513; PubChem:CID167306956
Local ready
Direct docking supported
E3L034230
BDB034230
US20240246935, Example 93
N#Cc1ccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)cc1
C30H30N4O4
510.594000
QELICZDPXLIBGQ-KUJIZVNSSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686514; PubChem:CID166469070
Local ready
Direct docking supported
E3L034231
BDB034231
US20240246935, Example 94
N#Cc1ccccc1C1CN([C@H]2CCCC[C@H]2Oc2ccc3c(c2)CN(C24CC(C2)C(=O)NC4=O)C3=O)C1
C30H30N4O4
510.594000
SLXLIDSVARTODS-AKXSHQFSSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686515; PubChem:CID166469056
Local ready
Direct docking supported
E3L034232
BDB034232
US20240246935, Example 95
N#Cc1ccccc1C1CN([C@H]2CCCC[C@@H]2Oc2ccc3c(c2)CN(C24CC(C2)C(=O)NC4=O)C3=O)C1
C30H30N4O4
510.594000
SLXLIDSVARTODS-JFHSDLNVSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686516; PubChem:CID166468863
Local ready
Direct docking supported
E3L034233
BDB034233
US20240246935, Example 96
CC1(c2ccccc2)CN([C@H]2CCCC[C@@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C29H33N3O4
487.600000
NECVJOWEYYAELX-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686517; PubChem:CID169030274
Local ready
Direct docking supported
E3L034234
BDB034234
US20240246935, Example 97
CC1(c2ccccc2)CN([C@@H]2CCCC[C@@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C29H33N3O4
487.600000
NECVJOWEYYAELX-PPCJQXESSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686518; PubChem:CID169030303
Local ready
Direct docking supported
E3L034235
BDB034235
US20240246935, Example 98
N#Cc1ccc(C2CN(C3CCCC3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)cc1
C28H28N4O4
484.556000
WZHDLMDPIYZYGB-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686519; PubChem:CID166469029
Local ready
Direct docking supported
E3L034236
BDB034236
US20240246935, Example 103
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccc(F)cc5Cl)C4)ccc3C2=O)C(=O)N1
C28H29ClFN3O4
526.008000
BLQUOOUXDNIYNP-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686524; PubChem:CID166469106
Local ready
Direct docking supported
E3L034237
BDB034237
US20240246935, Example 104
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CC(c5ccc(F)cc5Cl)C4)ccc3C2=O)C(=O)N1
C27H27ClFN3O4
511.981000
PONDLXPPMGYPKU-OTKIHZFJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686525; PubChem:CID166469099
Local ready
Direct docking supported
E3L034238
BDB034238
US20240246935, Example 105
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCC[C@@H]5N5CC(c6ccccc6)C5)ccc4C3=O)CC1C2
C28H29N3O4
471.557000
YDPHRJUTDBUMTN-NLCPVOBASA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686526; PubChem:CID166468820
Local ready
Direct docking supported
E3L034239
BDB034239
US20240246935, Example 106
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCCC[C@@H]5N5CCC(c6ccccc6)C5)ccc4C3=O)CC1C2
C30H33N3O4
499.611000
FBAFSJDBUPKOQD-IBBJLJOPSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686527; PubChem:CID166468797
Local ready
Direct docking supported
E3L034240
BDB034240
US20240246935, Example 107
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCC[C@@H]5N5CCC(c6ccccc6)C5)ccc4C3=O)CC1C2
C29H31N3O4
485.584000
HPPDCGYHJNLKTQ-IRCHEXTCSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686528; PubChem:CID167306859
Local ready
Direct docking supported