E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034201
BDB034201
US20240246935, Example 61
O=C1CCC(N2Cc3cc(O[C@@H]4CCCC[C@@H]4N4CC(c5ccc(OC(F)(F)F)cc5)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O5
557.569000
KACCHMVEEUHVIP-QNRWSGHRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686482; PubChem:CID167306910
Local ready
Direct docking supported
E3L034202
BDB034202
US20240246935, Example 63
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@H]4N4CC(c5ccc(OC(F)(F)F)cc5)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O5
557.569000
KACCHMVEEUHVIP-PPCJQXESSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686484; PubChem:CID166468756
Local ready
Direct docking supported
E3L034203
BDB034203
US20240246935, Example 64
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5cccc(F)c5F)C4)ccc3C2=O)C(=O)N1
C28H29F2N3O4
509.553000
SOUPBOVQNGQLQM-OTKIHZFJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686485; PubChem:CID166469091
Local ready
Direct docking supported
E3L034204
BDB034204
US20240246935, Example 65
O=C1CCC(N2Cc3c(ccc(O[C@H]4CCCC[C@@H]4N4CC(c5ccccc5)C4)c3F)C2=O)C(=O)N1
C28H30FN3O4
491.563000
RIQVFCDNSXZUJO-LIMDNCRJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686486; PubChem:CID166469001
Local ready
Direct docking supported
E3L034205
BDB034205
US20240246935, Example 67
O=C1CCC(N2Cc3cc(OC4CCCCC4N4CC(c5cccc(OC(F)(F)F)c5)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O5
557.569000
VUHDLHBVLCWRGI-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686488; PubChem:CID166469172
Local ready
Direct docking supported
E3L034206
BDB034206
US20240246935, Example 68
O=C1CCC(N2Cc3cc(OC4CCCCC4N4CC(c5ccccc5OC(F)(F)F)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O5
557.569000
BJKUCJPQXSYBIW-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686489; PubChem:CID166469119
Local ready
Direct docking supported
E3L034207
BDB034207
US20240246935, Example 69
O=C1CCC(N2Cc3cc(OC4CCCCC4N4CC(c5ccccc5C(F)(F)F)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O4
541.570000
ADTJOHKRUYWZNE-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686490; PubChem:CID166468925
Local ready
Direct docking supported
E3L034208
BDB034208
US20240246935, Example 70
N#Cc1cc(F)ccc1C1CN([C@@H]2CCC[C@@H]2Oc2ccc3c(c2)CN(C24CC(C2)C(=O)NC4=O)C3=O)C1
C29H27FN4O4
514.557000
WAQJMVNBJATBFL-DNZVTAPUSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686491; PubChem:CID166468972
Local ready
Direct docking supported
E3L034209
BDB034209
US20240246935, Example 71
N#Cc1cc(F)ccc1C1CN([C@@H]2CCC[C@H]2Oc2ccc3c(c2)CN(C24CC(C2)C(=O)NC4=O)C3=O)C1
C29H27FN4O4
514.557000
WAQJMVNBJATBFL-PJOZHDSTSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686492; PubChem:CID166469197
Local ready
Direct docking supported
E3L034210
BDB034210
US20240246935, Example 72
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CCC(c5ccccc5)CC4)ccc3C2=O)C(=O)N1
C29H33N3O4
487.600000
IOKRISVPYBIDNL-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686493; PubChem:CID166469181
Local ready
Direct docking supported
E3L034211
BDB034211
US20240246935, Example 73
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CC(c5ccc(-n6cccn6)cc5)C4)ccc3C2=O)C(=O)N1
C30H31N5O4
525.609000
CDFJOOSXMYKVQQ-LLOGBAKRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686494; PubChem:CID166468791
Local ready
Direct docking supported
E3L034212
BDB034212
US20240246935, Example 75
N#Cc1ccc(C2CN([C@@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c(Cl)c1
C29H29ClN4O4
533.028000
VVAWSIVQULOUDG-ITNFAHLUSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686496; PubChem:CID166469224
Local ready
Direct docking supported
E3L034213
BDB034213
US20240246935, Example 76
N#Cc1cccc(C2CN([C@H]3CCCC[C@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c1
C29H30N4O4
498.583000
FCFHFBKDFKYODE-KCIKGWAESA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686497; PubChem:CID166469235
Local ready
Direct docking supported
E3L034214
BDB034214
US20240246935, Example 77
N#Cc1cccc(C2CN([C@H]3CCCC[C@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)c1
C30H30N4O4
510.594000
VDGISIMRXHLHBN-URGSMFQNSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686498; PubChem:CID166469116
Local ready
Direct docking supported
E3L034215
BDB034215
US20240246935, Example 78
N#Cc1cccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C35CC(C3)C(=O)NC5=O)C4=O)C2)c1
C30H30N4O4
510.594000
VDGISIMRXHLHBN-KUJIZVNSSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686499; PubChem:CID166469234
Local ready
Direct docking supported
E3L034216
BDB034216
US20240246935, Example 79
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CCC(c5ccccc5)CC4)ccc3C2=O)C(=O)N1
C30H35N3O4
501.627000
XHCDFDXBDMNSNN-LLOGBAKRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686500; PubChem:CID166469230
Local ready
Direct docking supported
E3L034217
BDB034217
US20240246935, Example 80
O=C1CCC(N2Cc3c(ccc(O[C@H]4CCCC[C@@H]4N4CC(c5cccc(OC(F)F)c5)C4)c3F)C2=O)C(=O)N1
C29H30F3N3O5
557.569000
DJAKGNXHXRLVEK-LIMDNCRJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686501; PubChem:CID169030298
Local ready
Direct docking supported
E3L034218
BDB034218
US20240246935, Example 81
O=C1CCC(N2Cc3c(ccc(O[C@H]4CCCC[C@@H]4N4CC(c5ccc(OC(F)F)cc5)C4)c3F)C2=O)C(=O)N1
C29H30F3N3O5
557.569000
WRKMEHIMOXPCSL-LIMDNCRJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686502; PubChem:CID169030286
Local ready
Direct docking supported
E3L034219
BDB034219
US20240246935, Example 82
O=C1NC(=O)C2(N3Cc4cc(O[C@H]5CCC[C@@H]5N5CC(c6ccccc6Cl)C5)ccc4C3=O)CC1C2
C28H28ClN3O4
506.002000
FMWPHIIDMRKFRP-VPBDZVEJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686503; PubChem:CID167306891
Local ready
Direct docking supported
E3L034220
BDB034220
US20240246935, Example 83
N#Cc1cc(Cl)ccc1C1CN([C@H]2CCC[C@@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C28H27ClN4O4
519.001000
OXAOBLMMSKVSTA-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686504; PubChem:CID169030295
Local ready
Direct docking supported