E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034241
BDB034241
US20240246935, Example 108
N#Cc1ccccc1C1CN([C@H]2CCCC[C@@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C29H30N4O4
498.583000
QMPPHBLEILQRPD-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686529; PubChem:CID166469066
Local ready
Direct docking supported
E3L034242
BDB034242
US20240246935, Example 109
N#Cc1ccccc1C1CN([C@H]2CCCC[C@H]2Oc2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)C1
C29H30N4O4
498.583000
QMPPHBLEILQRPD-KCIKGWAESA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686530; PubChem:CID166468950
Local ready
Direct docking supported
E3L034243
BDB034243
US20240246935, Example 110
N#Cc1ccc(C2CN(C3CCCC3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)cc1F
C28H27FN4O4
502.546000
MJGIDMWRHLMUFQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686531; PubChem:CID166468812
Local ready
Direct docking supported
E3L034244
BDB034244
US20240246935, Example 111
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5cccc(F)c5)C4)ccc3C2=O)C(=O)N1
C28H30FN3O4
491.563000
YGNCHKSHVAJENZ-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686532; PubChem:CID166468796
Local ready
Direct docking supported
E3L034245
BDB034245
US20240246935, Example 112
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5cccc(N6CCOCC6)c5)C4)ccc3C2=O)C(=O)N1
C32H38N4O5
558.679000
QUAKGNVZJKIZKT-QBGWAWDMSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686533; PubChem:CID166469024
Local ready
Direct docking supported
E3L034246
BDB034246
US20240246935, Example 113
N#Cc1cccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c1
C29H30N4O4
498.583000
FCFHFBKDFKYODE-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686534; PubChem:CID166469037
Local ready
Direct docking supported
E3L034247
BDB034247
US20240246935, Example 115
N#Cc1ccc(C2CN([C@@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c(F)c1
C29H29FN4O4
516.573000
ATIBZKFTCXCIGR-ITNFAHLUSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686535; PubChem:CID166469074
Local ready
Direct docking supported
E3L034248
BDB034248
US20240246935, Example 116
N#Cc1ccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c(F)c1
C29H29FN4O4
516.573000
ATIBZKFTCXCIGR-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686536; PubChem:CID166468813
Local ready
Direct docking supported
E3L034249
BDB034249
US20240246935, Example 117
N#Cc1ccc(C2CN(C3CCCCC3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)cc1
C29H30N4O4
498.583000
OSZGWRSNWWMTPS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686537; PubChem:CID166469035
Local ready
Direct docking supported
E3L034250
BDB034250
US20240246935, Example 118
O=C1CCC(N2Cc3cc(OC4CCCCC4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O4
473.573000
DQYZQRGRHXEYPT-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686538; PubChem:CID166469211
Local ready
Direct docking supported
E3L034251
BDB034251
US20240246935, Example 119
N#Cc1ccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)cc1F
C29H29FN4O4
516.573000
NDZBHWLWXPFZRQ-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686539; PubChem:CID166469009
Local ready
Direct docking supported
E3L034252
BDB034252
US20240246935, Example 120
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C27H29N3O4
459.546000
OVYTZHPBZLSZRR-OTKIHZFJSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686540; PubChem:CID166468801
Local ready
Direct docking supported
E3L034253
BDB034253
US20240246935, Example 121
O=C1CCC(N2Cc3cc(O[C@H]4CCC[C@@H]4N4CCC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O4
473.573000
QJMSCZYLMFUEHU-AXOKTRKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686541; PubChem:CID166469138
Local ready
Direct docking supported
E3L034254
BDB034254
US20240246935, Example 122
N#Cc1ccc(C2CN([C@@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)cc1F
C29H29FN4O4
516.573000
NDZBHWLWXPFZRQ-ITNFAHLUSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686542; PubChem:CID166469108
Local ready
Direct docking supported
E3L034255
BDB034255
US20240246935, Example 124
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccc(N6CCOCC6)cc5)C4)ccc3C2=O)C(=O)N1
C32H38N4O5
558.679000
XVXVSENSXBWMNM-QBGWAWDMSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686544; PubChem:CID166468772
Local ready
Direct docking supported
E3L034256
BDB034256
US20240246935, Example 125
O=C1CC[C@@H](N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O4
473.573000
DQYZQRGRHXEYPT-GVAUOCQISA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686545; PubChem:CID166468849
Local ready
Direct docking supported
E3L034257
BDB034257
US20240246935, Example 126
COc1cccc(C2CN([C@H]3CCCC[C@@H]3Oc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)C2)c1
C29H33N3O5
503.599000
UWHATYRSJFKQFU-ZURQMKNRSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686546; PubChem:CID166468885
Local ready
Direct docking supported
E3L034258
BDB034258
(S,S)-Plx-4545
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O4
473.573000
DQYZQRGRHXEYPT-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686547; PubChem:CID166468781
Local ready
Direct docking supported
E3L034259
BDB034259
US20240246935, Example 128
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@H]4N4CC(c5ccccc5)C4)ccc3C2=O)C(=O)N1
C28H31N3O4
473.573000
DQYZQRGRHXEYPT-PPCJQXESSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686548; PubChem:CID166469222
Local ready
Direct docking supported
E3L034260
BDB034260
US20240246935, Example 129
O=C1CCC(N2Cc3cc(O[C@H]4CCCC[C@@H]4N4CC(c5ccccc5C(F)(F)F)C4)ccc3C2=O)C(=O)N1
C29H30F3N3O4
541.570000
ADTJOHKRUYWZNE-PFIFLBKHSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM686549; PubChem:CID166469226
Local ready
Direct docking supported