E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L003781
BDB003781
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 26
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)Oc3ccccc3C(=O)N4C)cc2C(F)(F)F)CC1
C26H27F3N6O2
512.536000
HTOAYVQONNPMFN-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86620; PubChem:CID57340674
Local ready
Direct docking supported
E3L003782
BDB003782
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 27
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)Sc3ccccc3C(=O)N4C)cc2C(F)(F)F)CC1
C26H27F3N6OS
528.604000
SAIJXCASEBDSII-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86621; PubChem:CID57340675
Local ready
Direct docking supported
E3L003783
BDB003783
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 28
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)N(C)c3c(C)cccc3C(=O)N4C)cc2C(F)(F)F)CC1
C28H32F3N7O
539.606000
GLSXPVFPHBFULR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86622; PubChem:CID57340676
Local ready
Direct docking supported
E3L003784
BDB003784
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 29
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)N(C)c3c(F)cccc3C(=O)N4C)cc2C(F)(F)F)CC1
C27H29F4N7O
543.569000
KTUZOTUSWXJDIS-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86623; PubChem:CID57340677
Local ready
Direct docking supported
E3L003785
BDB003785
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 30
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)N(C)c3cc(C)ccc3C(=O)N4C)cc2C(F)(F)F)CC1
C28H32F3N7O
539.606000
NESZTHUOBRFWLA-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86624; PubChem:CID57340678
Local ready
Direct docking supported
E3L003786
BDB003786
Benzo[e]pyrimido[5,4-b][1,4]diazepin-6(11H)-one, 31
CCN1CCN(Cc2ccc(Nc3ncc4c(n3)N(C)c3cc(F)ccc3C(=O)N4C)cc2C(F)(F)F)CC1
C27H29F4N7O
543.569000
RAJZNJVNZIBJJX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM86625; PubChem:CID57340679
Local ready
Direct docking supported
E3L003787
BDB003787
Jnk-IN-7
CN(C)C/C=C/C(=O)Nc1cccc(C(=O)Nc2ccc(Nc3nccc(-c4cccnc4)n3)cc2)c1
C28H27N7O2
493.571000
RADRIIWGHYFWPP-WEVVVXLNSA-N P51617 Interleukin-1 receptor-associated kinase 1
BindingDB, PubChem
BindingDB:BDBM86632; PubChem:CID57340685
Local ready
Direct docking supported
E3L003788
BDB003788
TS-011
ONC=Nc1ccc(N2CCOCC2)c(Cl)c1
C11H14ClN3O2
255.705000
ZTXADXBIGLLOFX-UHFFFAOYSA-N Q99732 Lipopolysaccharide-induced tumor necrosis factor-alpha factor
BindingDB, PubChem
BindingDB:BDBM86694; PubChem:CID9816527
Local ready
Direct docking supported
E3L003789
BDB003789
4-{[4-(Phenylamino)pyrimidin-2-Yl]amino}benzoic Acid
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3)n2)cc1
C17H14N4O2
306.325000
BUKMSYYNNHEANR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87047; PubChem:CID56587958
Local ready
Direct docking supported
E3L003790
BDB003790
BDBM87048
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3C(=O)O)n2)cc1
C18H14N4O4
350.334000
UIAQHDUGAOFVJM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87048; PubChem:CID698343
Local ready
Direct docking supported
E3L003791
BDB003791
Bisanilinopyrimidine inhibitor, 3
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3Cc3ccccc3)n2)cc1
C24H20N4O2
396.450000
SEYJAOXPGQWHKZ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87049; PubChem:CID91899096
Local ready
Direct docking supported
E3L003792
BDB003792
BDBM87050
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3C(F)(F)F)n2)cc1
C18H13F3N4O2
374.322000
QFNWNXOHCUAEBM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87050; PubChem:CID56587963
Local ready
Direct docking supported
E3L003793
BDB003793
BDBM87051
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3OC(F)(F)F)n2)cc1
C18H13F3N4O3
390.321000
VKIURNGMKFWIQX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87051; PubChem:CID56587968
Local ready
Direct docking supported
E3L003794
BDB003794
BDBM87052
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3F)n2)cc1
C17H13FN4O2
324.315000
DSRXYFSONVBAKS-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87052; PubChem:CID56587961
Local ready
Direct docking supported
E3L003795
BDB003795
BDBM87053
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3Cl)n2)cc1
C17H13ClN4O2
340.770000
BAZFHAGOCKJYHX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87053; PubChem:CID56587959
Local ready
Direct docking supported
E3L003796
BDB003796
BDBM87054
O=C(O)c1ccc(Nc2nccc(Nc3ccccc3Br)n2)cc1
C17H13BrN4O2
385.221000
NCXZWZMYZVWHNN-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87054; PubChem:CID56587964
Local ready
Direct docking supported
E3L003797
BDB003797
BDBM87055
N#Cc1ccccc1Nc1ccnc(Nc2ccc(C(=O)O)cc2)n1
C18H13N5O2
331.335000
MEKVNSMGVQRYJI-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM87055; PubChem:CID56587965
Local ready
Direct docking supported
E3L003798
BDB003798
BDBM87350
CC(C)(C)OC(=O)NCc1cn(C2CCCCNC2=O)nn1
C14H23N5O3
309.370000
JTHUUBDVROYBNW-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM87350; PubChem:CID176081787
Local ready
Direct docking supported
E3L003799
BDB003799
US20250388593, Example 2
CC(C)(C)OC(=O)N1CCC(c2cn(C3CCCC(=O)NC3=O)nn2)CC1
C18H27N5O4
377.445000
SINYDHDOMXWBAQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM87352; PubChem:CID177778569
Local ready
Direct docking supported
E3L003800
BDB003800
US20250388593, Example 3
CC(C)(C)OC(=O)Nc1ccc(-c2cn(C3CCCC(=O)NC3=O)nn2)cc1
C19H23N5O4
385.424000
SRHUMUVTJMKTDN-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM87353; PubChem:CID177778600
Local ready
Direct docking supported