E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038021
BDB038021
US12310975, Example 243
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(OC)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H47ClN10O7
815.332000
RKDAFEKIEAOMFV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743708; PubChem:CID176371143
Local ready
Direct docking supported
E3L038022
BDB038022
US12310975, Example 244
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C)CC4)ncc3Cl)ccc2n(CCCOc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)c1=O
C37H38ClN9O8
772.219000
FIAQQEIUHKGBIW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743709; PubChem:CID176371088
Local ready
Direct docking supported
E3L038023
BDB038023
US12310975, Example 245
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O)(CN5CCN(c6ccc7c(c6)C(=O)C(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O8
826.311000
RYJMSRAFAYCCMJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743710; PubChem:CID176734213
Local ready
Direct docking supported
E3L038024
BDB038024
US12310975, Example 246
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H39ClN10O7
783.246000
PUMVETVHVKMLAF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743711; PubChem:CID156293080
Local ready
Direct docking supported
E3L038025
BDB038025
US12310975, Example 247
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CCOC5CN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O8
812.284000
YXCXCEVAHYULNC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743712; PubChem:CID156293078
Local ready
Direct docking supported
E3L038026
BDB038026
US12310975, Example 248
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CC6(C5)CN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C)c1=O
C41H43ClN10O7
823.311000
WKFCNXYVYDRROO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743713; PubChem:CID156278503
Local ready
Direct docking supported
E3L038027
BDB038027
US12310975, Example 249
Cn1c(=O)c(N2CCC2=O)cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C40H41ClN10O6
793.285000
INURZQFPSZXUFF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743714; PubChem:CID156292686
Local ready
Direct docking supported
E3L038028
BDB038028
US12310975, Example 250
CCn1c(=O)c(OCC(=O)NC)cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C41H45ClN10O7
825.327000
XCTYVJLMWSOOKS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743715; PubChem:CID176371100
Local ready
Direct docking supported
E3L038029
BDB038029
US12310975, Example 252
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CCOC5CN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O8
812.284000
AFIRKZRPAAYDDY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743716; PubChem:CID156278495
Local ready
Direct docking supported
E3L038030
BDB038030
US12310975, Example 253
CNC(=O)COc1cc2cc(Nc3cc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H44ClN9O7
810.312000
FLDVRLKONDPDLO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743717; PubChem:CID156292653
Local ready
Direct docking supported
E3L038031
BDB038031
US12310975, Example 254
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)c(Cl)cc3Cl)ccc2n(C)c1=O
C41H43Cl2N9O7
844.757000
SSKRCYVAZYQKKC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743718; PubChem:CID176370978
Local ready
Direct docking supported
E3L038032
BDB038032
US12310975, Example 255
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)C5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H38ClN9O8
784.230000
VDPPJNXWDCTGIG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743719; PubChem:CID156293081
Local ready
Direct docking supported
E3L038033
BDB038033
US12310975, Example 256
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CC6(C5)CN(c5cccc7c5C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C)c1=O
C41H43ClN10O7
823.311000
DMQPUUDDUPWCKT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743720; PubChem:CID176371080
Local ready
Direct docking supported
E3L038034
BDB038034
US12310975, Example 257
CC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H46ClN9O7
824.339000
QHDKDPPRFWKLDW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743721; PubChem:CID156292395
Local ready
Direct docking supported
E3L038035
BDB038035
US12310975, Example 258
CN1CC[C@@H](Oc2cc3cc(Nc4nc(N5CCC(CN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)ncc4Cl)ccc3n(C)c2=O)C1=O
C42H45ClN10O7
837.338000
SEZJFWNOMSOENW-ZHZZGXISSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743722; PubChem:CID156291879
Local ready
Direct docking supported
E3L038036
BDB038036
US12310975, Example 259
CN1CC[C@H](Oc2cc3cc(Nc4nc(N5CCC(CN6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)ncc4Cl)ccc3n(C)c2=O)C1=O
C42H45ClN10O7
837.338000
SEZJFWNOMSOENW-OBOZPERJSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743723; PubChem:CID156291880
Local ready
Direct docking supported
E3L038037
BDB038037
US12310975, Example 260
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H43ClN10O7
811.300000
TVCNCYBPPZWERF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743724; PubChem:CID156292348
Local ready
Direct docking supported
E3L038038
BDB038038
US12310975, Example 261
CNC(=O)COc1cc2cc(Nc3cc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C43H48ClN9O7
838.366000
DYDLPTMIMTXJMP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743725; PubChem:CID156292349
Local ready
Direct docking supported
E3L038039
BDB038039
US12310975, Example 262
CNC(=O)CNc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H44ClN11O6
810.316000
FUKSUCMMWKSGIV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743726; PubChem:CID156292392
Local ready
Direct docking supported
E3L038040
BDB038040
US12310975, Example 263
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C42H47ClN10O7
839.354000
UHFXIPGEBDHOSL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743727; PubChem:CID156278480
Local ready
Direct docking supported