E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038041
BDB038041
US12310975, Example 264
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(OC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C40H42ClN9O8
812.284000
DCDOVMCJLLAKDE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743728; PubChem:CID156292858
Local ready
Direct docking supported
E3L038042
BDB038042
US12310975, Example 265
CONC(=O)COc1cc2cc(Nc3cc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C43H48ClN9O8
854.365000
JFFSABHFHNFIQM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743729; PubChem:CID156292859
Local ready
Direct docking supported
E3L038043
BDB038043
US12310975, Example 266
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H47ClN10O7
839.354000
JNVOVTGNZPQCAU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743730; PubChem:CID156278321
Local ready
Direct docking supported
E3L038044
BDB038044
US12310975, Example 270
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)CN(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H49ClN10O6
825.371000
UORBIQUQZISTDO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743731; PubChem:CID156291605
Local ready
Direct docking supported
E3L038045
BDB038045
US12310975, Example 271
CNC(=O)COc1cc2cc(Nc3nc(N4CCOC(CN5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)C4)ncc3Cl)ccc2n(C)c1=O
C39H41ClN10O8
813.272000
AIGTWVXHTZMDMO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743732; PubChem:CID156291606
Local ready
Direct docking supported
E3L038046
BDB038046
US12310975, Example 272
CNC(=O)COc1cc2cc(Nc3nc(N4CCOC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)C4)ncc3Cl)ccc2n(C)c1=O
C39H41ClN10O8
813.272000
IVYJJSTVTFUUMS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743733; PubChem:CID156291607
Local ready
Direct docking supported
E3L038047
BDB038047
US12310975, Example 273
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cnc(C(=O)NC7CCC(=O)NC7=O)nc6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C37H43ClN12O6
787.282000
FNVWNXGKENWLDM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743734; PubChem:CID176370931
Local ready
Direct docking supported
E3L038048
BDB038048
US12310975, Example 274
CNC(=O)C1Oc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2N(C)C1=O
C40H45ClN10O7
813.316000
DVSXOIZZNUTYLX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743735; PubChem:CID176371022
Local ready
Direct docking supported
E3L038049
BDB038049
US12310975, Example 275
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc(F)c6C(=O)NC6CCC(=O)NC6=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H44ClFN10O6
803.296000
CJXSGITXVKENLM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743736; PubChem:CID176371046
Local ready
Direct docking supported
E3L038050
BDB038050
US12310975, Example 276
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)cc6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H45ClN10O6
785.306000
YSYCUXSZZLYHNA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743737; PubChem:CID176370919
Local ready
Direct docking supported
E3L038051
BDB038051
US12310975, Example 277
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(F)c(C(=O)NC7CCC(=O)NC7=O)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C39H44ClFN10O6
803.296000
GKFKYJGIZDYDPC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743738; PubChem:CID176370970
Local ready
Direct docking supported
E3L038052
BDB038052
US12310975, Example 278
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)nn6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C37H43ClN12O6
787.282000
BXDHMAOKZYBTRT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743739; PubChem:CID176371040
Local ready
Direct docking supported
E3L038053
BDB038053
US12310975, Example 279
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H48ClN11O7
854.369000
MVWVUOBVAAISNY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743740; PubChem:CID156292412
Local ready
Direct docking supported
E3L038054
BDB038054
US12310975, Example 280
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC(C)(C)N5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H48ClN11O7
854.369000
DENRWTCXEFWINX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743741; PubChem:CID156292401
Local ready
Direct docking supported
E3L038055
BDB038055
US12310975, Example 281
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cnc(C(=O)NC7CCC(=O)NC7=O)cn6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C37H43ClN12O6
787.282000
QHCBMWYTNWYSHN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743742; PubChem:CID176370948
Local ready
Direct docking supported
E3L038056
BDB038056
US12310975, Example 282
Cn1c(=O)c(-c2nnc[nH]2)cc2cc(Nc3nc(N4CCC(CN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C39H39ClN12O5
791.273000
BCWSPNZRGQLXAQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743743; PubChem:CID176370998
Local ready
Direct docking supported
E3L038057
BDB038057
US12310975, Example 283
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(n6cnc7c(C(=O)NC8CCC(=O)NC8=O)cccc76)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C41H46ClN11O6
824.343000
IMBDAYJLQHVRHB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743744; PubChem:CID176371007
Local ready
Direct docking supported
E3L038058
BDB038058
US12310975, Example 284
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)N(CC5CCN(c6ccc(C(=O)NC7CCC(=O)NC7=O)c(F)c6)CC5)[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C41H48ClFN10O6
831.350000
NWPNKLJSLLTREU-OHNATUCJSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743745; PubChem:CID176370924
Local ready
Direct docking supported
E3L038059
BDB038059
US12310975, Example 285
Cc1nnc(-c2cc3cc(Nc4nc(N5CCN(C(C)(C)C6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)ncc4Cl)ccc3n(C)c2=O)o1
C42H44ClN11O6
834.338000
ZSDKMILDBPWLQT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743746; PubChem:CID176371070
Local ready
Direct docking supported
E3L038060
BDB038060
US12310975, Example 286
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC(c6coc(C(=O)NC7CCC(=O)NC7=O)c6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C38H44ClN9O7
774.279000
CEESPZNINQXIDU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743747; PubChem:CID176371015
Local ready
Direct docking supported