E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L005201
BDB005201
US8680132, CB061-Isomer B
CC(C)(C)C[C@@H]1N[C@@H](C(=O)NC2CCC(O)CC2)[C@H](c2cccc(Cl)c2)[C@]12C(=O)Nc1cc(Cl)c(F)cc12
C29H34Cl2FN3O3
562.513000
SJAWWEKCOBDMOT-NZVKTDFMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM119745; PubChem:CID53476987
Local ready
Direct docking supported
E3L005202
BDB005202
US8680132, CB087-Isomer B
O=C(NC1CCC(O)CC1)[C@@H]1N[C@@H](c2ccccc2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C30H28Cl2FN3O3
568.476000
WQZCMLRWVAQNJN-PUTKSNFBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM119746; PubChem:CID69498317
Local ready
Direct docking supported
E3L005203
BDB005203
US8680132, CB083-Isomer B
O=C(NC1CCC(O)CC1)[C@@H]1N[C@@H](c2ccccc2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1Cc1ccccc1
C31H32ClN3O3
530.068000
AYTRBAIVAGROLH-YUQYGQRHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM119747; PubChem:CID69498318
Local ready
Direct docking supported
E3L005204
BDB005204
US8680132, CB084-Isomer B
CC(C)(C)C[C@@H]1N[C@@H](C(=O)NC2CCC(O)CC2)[C@H](Cc2ccccc2)[C@]12C(=O)Nc1cc(Cl)ccc12
C30H38ClN3O3
524.105000
LRJBXXRILYOKRP-CPMFLMQVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM119748; PubChem:CID68060954
Local ready
Direct docking supported
E3L005205
BDB005205
BDBM119749
CCN1[C@@H](CC(C)(C)C)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@@H](c2cccc(Cl)c2F)[C@@H]1C(=O)N[C@H]1C[C@@](C)(O)C1
C30H36Cl2FN3O3
576.540000
POOPNLXAGUARSE-SRZAULEESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM119749
Local ready
Direct docking supported
E3L005206
BDB005206
BDBM119750
CN1[C@@H](CC(C)(C)C)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@@H](c2cccc(Cl)c2F)[C@@H]1C(=O)N[C@H]1C[C@@](C)(O)C1
C29H34Cl2FN3O3
562.513000
DYTUNXFWZMTYRO-PGVPUVQYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM119750
Local ready
Direct docking supported
E3L005207
BDB005207
BDBM119751
CC(C)(C)C[C@@H]1N(N(C(=O)C(F)(F)F)C2CC(C)(O)C2)[C@@H](C(=O)O)[C@H](c2cccc(F)c2F)C12C(=O)Nc1cc(Cl)c(F)cc12
C30H30ClF6N3O5
662.027000
XIZIOVPHELHJAL-OBFAPSOSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM119751
Local ready
Direct docking supported
E3L005208
BDB005208
BDBM121388
Cc1cccc(NC(=O)Nc2ccc(-c3csc4c(-c5cnn(C[C@H](C)O)c5)cnc(N)c34)cc2)c1
C27H26N6O2S
498.612000
VKBFHTIUXUCYRQ-KRWDZBQOSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM121388; PubChem:CID68620328
Local ready
Direct docking supported
E3L005209
BDB005209
BDBM121389
COc1ccc(NC(=O)Nc2ccc(-c3csc4c(-c5cnn(CC(C)(C)O)c5)cnc(N)c34)cc2)cc1
C28H28N6O3S
528.638000
ADLPKFFMGIJZIM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM121389; PubChem:CID46223479
Local ready
Direct docking supported
E3L005210
BDB005210
BDBM121390
COc1ccc(NC(=O)Nc2ccc(-c3csc4c(-c5cnn(C[C@H](O)CO)c5)cnc(N)c34)cc2)cc1
C27H26N6O4S
530.610000
BRTHUECZMVKNMQ-FQEVSTJZSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM121390; PubChem:CID46223480
Local ready
Direct docking supported
E3L005211
BDB005211
BDBM124945
CC1c2cc(F)cc(C(N)=O)c2C(=O)N1C1CCN(C2CCCCC2)CC1
C21H28FN3O2
373.472000
JMSHIEXDPIOMCA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124945; PubChem:CID49871952
Local ready
Direct docking supported
E3L005212
BDB005212
BDBM124946
CC1(C)c2cc(F)cc(C(N)=O)c2C(=O)N1C1CCN(C2CCCCC2)CC1
C22H30FN3O2
387.499000
RHZLKURJTVXKLN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124946; PubChem:CID49872542
Local ready
Direct docking supported
E3L005213
BDB005213
BDBM124948
CC1c2cccc(C(N)=O)c2C(=O)N1c1ccc(N2CCOCC2)cc1
C20H21N3O3
351.406000
AKTXWCQUUJBHMH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124948; PubChem:CID49872922
Local ready
Direct docking supported
E3L005214
BDB005214
BDBM124949
CC1c2cccc(C(N)=O)c2C(=O)N1c1ccc(N2CCCCC2)cc1
C21H23N3O2
349.434000
BSVYTBKKKRLCDP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124949; PubChem:CID49872640
Local ready
Direct docking supported
E3L005215
BDB005215
BDBM124950
CC1c2cccc(C(N)=O)c2C(=O)N1C1CCN(C2CCCCC2)CC1
C21H29N3O2
355.482000
OYGLTKXMFGWXJT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124950; PubChem:CID49873225
Local ready
Direct docking supported
E3L005216
BDB005216
BDBM124951
C[C@H]1c2cccc(C(N)=O)c2C(=O)N1C1CCN(C2CCCCC2)CC1
C21H29N3O2
355.482000
OYGLTKXMFGWXJT-AWEZNQCLSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM124951
Local ready
Direct docking supported
E3L005217
BDB005217
BDBM124952
C[C@@H]1c2cccc(C(N)=O)c2C(=O)N1C1CCN(C2CCCCC2)CC1
C21H29N3O2
355.482000
OYGLTKXMFGWXJT-CQSZACIVSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124952; PubChem:CID49873226
Local ready
Direct docking supported
E3L005218
BDB005218
BDBM124953
CC1c2cccc(C(N)=O)c2C(=O)N1C1CCN(C2CCC(F)(F)CC2)CC1
C21H27F2N3O2
391.462000
HIVSCMNNQFXGAK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124953; PubChem:CID49873227
Local ready
Direct docking supported
E3L005219
BDB005219
BDBM124954
CC1c2cccc(C(N)=O)c2C(=O)N1C1CCN(Cc2ccc3[nH]ccc3c2)CC1
C24H26N4O2
402.498000
VIRDOICEJCBSHC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124954; PubChem:CID49873228
Local ready
Direct docking supported
E3L005220
BDB005220
BDBM124955
CC1c2cccc(C(N)=O)c2C(=O)N1C1CCN(Cc2cn(C(C)C)c3ccccc23)CC1
C27H32N4O2
444.579000
AMCUOQGXZLNRJN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM124955; PubChem:CID49872919
Local ready
Direct docking supported