E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L063001
BDB063001
2-Amino-6-bromo-1,3-benzothiazol-4-ol
Nc1nc2c(O)cc(Br)cc2s1
C7H5BrN2OS
245.101000
BDPNQSDLTBROFQ-UHFFFAOYSA-N Q96L73 Histone-lysine N-methyltransferase, H3 lysine-36 specific
BindingDB, PubChem
BindingDB:BDBM50608076; PubChem:CID138682563
Local ready
Direct docking supported
E3L063002
BDB063002
2-Amino-6-(2-methylaziridin-1-yl)benzo[d]thiazol-4-ol
CC1CN1c1cc(O)c2nc(N)sc2c1
C10H11N3OS
221.285000
PHBIAWCGMOCBGF-UHFFFAOYSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase, H3 lysine-36 specific, Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50608077; PubChem:CID138713923
Local ready
Direct docking supported
E3L063003
BDB063003
5,7-Dimethyl-1,2,3,4-tetrahydro-1,8-naphthyridine
Cc1cc(C)c2c(n1)NCCC2
C10H14N2
162.236000
DXIRHDQUVVQLGI-UHFFFAOYSA-N Q96T88 E3 ubiquitin-protein ligase UHRF1
BindingDB, PubChem
BindingDB:BDBM50608078; PubChem:CID12378181
Local ready
Direct docking supported
E3L063004
BDB063004
2,4-Dimethylpyridine
Cc1ccnc(C)c1
C7H9N
107.156000
JYYNAJVZFGKDEQ-UHFFFAOYSA-N Q96T88 E3 ubiquitin-protein ligase UHRF1
BindingDB, PubChem
BindingDB:BDBM50608079; PubChem:CID7936
Local ready
Direct docking supported
E3L063005
BDB063005
BDBM50608080
Cc1ccc2c(-c3c(-c4c(C)cc(CN)cc4C)ncn3C)ccnc2c1
C23H24N4
356.473000
ARHSYLADQLXDPH-UHFFFAOYSA-N Q9BZ95 Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50608080; PubChem:CID171354031
Local ready
Direct docking supported
E3L063006
BDB063006
5-Methyl-6-phenyl-2-piperidin-4-yl-pyridazin-3-one
Cc1cc(=O)n(C2CCNCC2)nc1-c1ccccc1
C16H19N3O
269.348000
TWZULJZXADJJPI-UHFFFAOYSA-N Q9BZ95 Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50608081; PubChem:CID66510155
Local ready
Direct docking supported
E3L063007
BDB063007
1-Methyl-4-phenyl-5-(4-pyridyl)imidazole
Cn1cnc(-c2ccccc2)c1-c1ccncc1
C15H13N3
235.290000
NSJCXUONRHOYTD-UHFFFAOYSA-N Q9BZ95 Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50608082; PubChem:CID18771483
Local ready
Direct docking supported
E3L063008
BDB063008
BDBM50608083
Clc1ccc(OCCCNC2=NCCN2)c(Cl)c1
C12H15Cl2N3O
288.178000
XIKGAVKOOOYGIY-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50608083; PubChem:CID53593645
Local ready
Direct docking supported
E3L063009
BDB063009
BDBM50608291
COc1ccc(C[C@@H](CC(=O)CC(C)(C)N)C(=O)N[C@@H](Cc2cnc[nH]2)C(=O)CC(CC2CCCCC2)[C@@H](O)[C@@H](O)CC(C)C)cc1
C37H58N4O6
654.893000
XGJIQFLQIRKWDZ-AKVUPKOTSA-N P00797 Renin
BindingDB
BindingDB:BDBM50608291
Local ready
Direct docking supported
E3L063010
BDB063010
BDBM50608292
CC(C)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)C(Cc1nccs1)NC(=O)[C@H](Cc1ccccc1)CS(=O)(=O)N1CCN(C)CC1
C35H55N5O6S2
705.988000
SWRMRRVRHGMRBA-YAQBETDZSA-N P00797 Renin
BindingDB
BindingDB:BDBM50608292
Local ready
Direct docking supported
E3L063011
BDB063011
BDBM50608358
CC(N)C(=O)NC1CSCc2cc3cc(c2)CSC(C(=O)NC(C)C(N)=O)NC(=O)C(Cc2ccc(O)cc2)NC(=O)C(CC(N)=O)NC(=O)C(CCC(N)=O)NC(=O)C(Cc2c[nH]cn2)NC(=O)C(C(C)O)NC(=O)C(CSC3)NC(=O)C(CCCNC(=N)N)NC(=O)C(C)NC(=O)C2CCCN2C(=O)C(Cc2c[nH]c3ccccc23)NC(=O)C(CCCNC(=N)N)NC1=O
C82H115N27O19S3
1879.193000
SJBURJCQSMMNIC-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM50608358
Local ready
Direct docking supported
E3L063012
BDB063012
BDBM50608359
CC(=O)NC1CSCc2cc3cc(c2)CSC(C(N)=O)NC(=O)C(CC(C)C)NC(=O)C(CC(=O)O)NC(=O)C(CCC(N)=O)NC(=O)C(Cc2c[nH]cn2)NCC(C)NC(=O)C(CSC3)NC(=O)C(CCCNC(=N)N)NC(=O)C(Cc2ccc(O)cc2)NC(=O)C2CCN2C(=O)C(Cc2ccccc2)NC(=O)C(CO)NC1=O
C74H102N20O18S3
1655.953000
NATBJNOLJXJRBB-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM50608359
Local ready
Direct docking supported
E3L063013
BDB063013
BDBM50608360
CC(N)C(=O)NC1CSCc2cc3cc(c2)CSCC(C(=O)NC(C)C(N)=O)NC(=O)C(CCCNC(=N)N)NC(=O)C(C(C)C)NC(=O)C(CC(N)=O)NC(=O)C(CSC3)NC(=O)C(C)NC(=O)C(CCCCN)NC(=O)C(Cc2ccccc2)NC1=O
C57H87N17O12S3
1298.631000
KECRAMBCZUQJGL-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB
BindingDB:BDBM50608360
Local ready
Direct docking supported
E3L063014
BDB063014
BDBM50608424
O=C(NCCc1ccc(Cl)cc1)c1ccc2nc3c(c(Cl)c2c1)CCCC3
C22H20Cl2N2O
399.321000
FXMOERHQKDDTCC-UHFFFAOYSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM50608424; PubChem:CID171351204
Local ready
Direct docking supported
E3L063015
BDB063015
BDBM50609271
Cc1cnc2c(c1)c(Nc1cnccc1C(=O)O)cn2CCN1CCC(F)(F)CC1
C21H23F2N5O2
415.444000
KDYQCOVJKZYFKX-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609271; PubChem:CID171358579
Local ready
Direct docking supported
E3L063016
BDB063016
BDBM50609272
O=C(O)c1ccnc(NCc2cccc(F)c2)c1
C13H11FN2O2
246.241000
YFUUKCJIHIACCK-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609272; PubChem:CID28970945
Local ready
Direct docking supported
E3L063017
BDB063017
2-(Oxaloamino)-2-oxoacetic acid
O=C(O)C(=O)NC(=O)C(=O)O
C4H3NO6
161.069000
YIHINPWRGAKPRC-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609273; PubChem:CID85641767
Local ready
Direct docking supported
E3L063018
BDB063018
BDBM50609274
CC(C)(CNC(=O)c1cn(-c2ccccc2)nc1-c1ccccc1)N1CCOCC1
C24H28N4O2
404.514000
WBWADLLKNGUCBS-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609274; PubChem:CID8933715
Local ready
Direct docking supported
E3L063019
BDB063019
BDBM50609275
C=CCOc1c(CNn2cnnc2O)cccc1OC
C13H16N4O3
276.296000
ULWYKBXMZDRYQX-UHFFFAOYSA-N P29375, P41229 Lysine-specific demethylase 5C, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609275; PubChem:CID171356704
Local ready
Direct docking supported
E3L063020
BDB063020
BDBM50609276
C=c1c(C(N)c2ccc(C)cc2)cc(=C)c2[nH]c(C)nc12
C18H19N3
277.371000
KYDKDHYQJZTWCN-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50609276; PubChem:CID171356042
Local ready
Direct docking supported