E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010081
BDB010081
BDBM220261
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@@H](C)c4ccc(Cl)cc4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C29H23ClF3N5O2
565.983000
JITFOZQDOZFHBB-KRWDZBQOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220261; PubChem:CID90318451
Local ready
Direct docking supported
E3L010082
BDB010082
BDBM220262
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C(C)(C)C)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C27H28F3N5O2
511.548000
RTAIJZFVCRNVRQ-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220262; PubChem:CID90324979
Local ready
Direct docking supported
E3L010083
BDB010083
BDBM220263
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C(C)C)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C26H26F3N5O2
497.521000
LIYYWAXIZLMFQT-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220263; PubChem:CID90324980
Local ready
Direct docking supported
E3L010084
BDB010084
BDBM220264
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@@H](C)C(C)C)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C26H26F3N5O2
497.521000
LIYYWAXIZLMFQT-INIZCTEOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220264; PubChem:CID90324982
Local ready
Direct docking supported
E3L010085
BDB010085
BDBM220265
Cc1cccc(-c2nc3nc(C(=O)O)nc(NCC4CCCCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C28H28F3N5O2
523.559000
CEGPVPCDMIUYQE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220265; PubChem:CID90318077
Local ready
Direct docking supported
E3L010086
BDB010086
BDBM220266
CCN(CC)c1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C25H24F3N5O2
483.494000
PKRBNQUPZRULOH-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220266; PubChem:CID90318672
Local ready
Direct docking supported
E3L010087
BDB010087
BDBM220267
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C4CC4)C(F)(F)F)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C26H21F6N5O2
549.475000
VRMVONAFRKIKOU-LJQANCHMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220267; PubChem:CID90325067
Local ready
Direct docking supported
E3L010088
BDB010088
BDBM220268
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@@H](C4CC4)C(F)(F)F)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C26H21F6N5O2
549.475000
VRMVONAFRKIKOU-IBGZPJMESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220268; PubChem:CID118558767
Local ready
Direct docking supported
E3L010089
BDB010089
BDBM220269
CC[C@H](Nc1nc(C(=O)O)nc2nc(-c3cc(C(C)C)ccn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H31F3N6O2
552.601000
OZEKBIYAVYVMSQ-NRFANRHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220269; PubChem:CID90318851
Local ready
Direct docking supported
E3L010090
BDB010090
BDBM220270
CC[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(C(C)C)ccn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H31F3N6O2
552.601000
OZEKBIYAVYVMSQ-OAQYLSRUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220270; PubChem:CID90318453
Local ready
Direct docking supported
E3L010091
BDB010091
BDBM220271
COc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3(C)C)c2n1Cc1ccc(C(F)(F)F)cc1
C29H30F3N5O3
553.585000
RHSHBIMIROHIKP-QRIPLOBPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220271; PubChem:CID90325065
Local ready
Direct docking supported
E3L010092
BDB010092
BDBM220272
CC(C)c1ccnc(-c2nc3nc(C(=O)O)nc(N[C@@H](c4ccccc4)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C33H31F3N6O2
600.645000
FINLGEULGOVMAL-SANMLTNESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220272; PubChem:CID90318770
Local ready
Direct docking supported
E3L010093
BDB010093
BDBM220273
CC(C)c1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](c4ccccc4)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C33H31F3N6O2
600.645000
FINLGEULGOVMAL-AREMUKBSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220273; PubChem:CID90317990
Local ready
Direct docking supported
E3L010094
BDB010094
BDBM220274
CCN(C)c1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C24H22F3N5O2
469.467000
PSHJMKFBGVEADE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220274; PubChem:CID90318406
Local ready
Direct docking supported
E3L010095
BDB010095
BDBM220275
CC[C@@H](C)Nc1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C25H24F3N5O2
483.494000
RSTGVYFGLXAZSX-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220275; PubChem:CID90325613
Local ready
Direct docking supported
E3L010096
BDB010096
BDBM220278
CCC(C)CNc1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C26H26F3N5O2
497.521000
MCGBSRRPYRRZPC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220278; PubChem:CID90317847
Local ready
Direct docking supported
E3L010097
BDB010097
BDBM220279
CCCC(CCC)Nc1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C28H30F3N5O2
525.575000
WTRQWFJSGXEDRP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220279; PubChem:CID90318196
Local ready
Direct docking supported
E3L010098
BDB010098
Mivebresib
CCS(=O)(=O)Nc1ccc(Oc2ccc(F)cc2F)c(-c2cn(C)c(=O)c3[nH]ccc23)c1
C22H19F2N3O4S
459.474000
RDONXGFGWSSFMY-UHFFFAOYSA-N O15164, Q09472, Q92831 Histone acetyltransferase p300, Transcription intermediary factor 1-alpha, Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM220447; PubChem:CID71600087
Local ready
Direct docking supported
E3L010099
BDB010099
BDBM220538
CCCCN(CCC)c1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C28H30F3N5O2
525.575000
SYXCOHLQTZTPCK-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220538; PubChem:CID90317728
Local ready
Direct docking supported
E3L010100
BDB010100
BDBM220544
CCCN(CC)c1nc(C(=O)O)nc2nc(-c3cccc(C)c3)n(Cc3ccc(C(F)(F)F)cc3)c12
C26H26F3N5O2
497.521000
WPMFQRGILGQRDI-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM220544; PubChem:CID90318179
Local ready
Direct docking supported