E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010121
BDB010121
BDBM221468
CC(C)c1ccnc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2N)c1
C28H30F3N7O2
553.589000
UVTXIGRMOCTEDE-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221468; PubChem:CID90318431
Local ready
Direct docking supported
E3L010122
BDB010122
BDBM221469
C[C@H](Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)c1ccc(F)cc1
C28H28F4N6O2
556.564000
RVSQWYWJCJCCCP-CVEARBPZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221469; PubChem:CID90325206
Local ready
Direct docking supported
E3L010123
BDB010123
BDBM221470
C[C@@H](Nc1nc(C(=O)O)nc2nc(N(C)c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H27F3N6O2
524.547000
URKVPMIOBVMUGO-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221470; PubChem:CID90318745
Local ready
Direct docking supported
E3L010124
BDB010124
BDBM221471
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3Cc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C32H35F3N6O2
592.666000
ARZKPKITNJVOTN-VGOKPJQXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221471; PubChem:CID90325207
Local ready
Direct docking supported
E3L010125
BDB010125
BDBM221472
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCOC[C@H]3c3ccccc3)n(Cc3ccc(Cl)c(F)c3)c12)C1CCC1
C30H30ClFN8O3
605.074000
WNTSSWMQMGJUBQ-HXOBKFHXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221472; PubChem:CID136632471
Local ready
Direct docking supported
E3L010126
BDB010126
BDBM221473
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCN(C)CC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C24H28F3N7O2
503.529000
HVALXMWLPATETM-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221473; PubChem:CID90318381
Local ready
Direct docking supported
E3L010127
BDB010127
BDBM221474
C[C@@H](Nc1nc(C(=O)O)nc2nc(N[C@@H](CO)c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H29F3N6O3
554.573000
VUCORYCZTBOMBO-IERDGZPVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221474; PubChem:CID90325071
Local ready
Direct docking supported
E3L010128
BDB010128
BDBM221475
C[C@H](CO)Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C23H27F3N6O3
492.502000
KTDIYIBRNXDKCP-CHWSQXEVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221475; PubChem:CID90325068
Local ready
Direct docking supported
E3L010129
BDB010129
BDBM221476
C[C@@H](Nc1nc(C(=O)O)nc2nc(N[C@H](CO)c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H29F3N6O3
554.573000
VUCORYCZTBOMBO-IIBYNOLFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221476; PubChem:CID90325070
Local ready
Direct docking supported
E3L010130
BDB010130
BDBM221477
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCOCC3)n(Cc3ccc(Cl)cc3)c12)C1CC1
C22H25ClN6O3
456.934000
KHKQIUHYIGVAER-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221477; PubChem:CID90318490
Local ready
Direct docking supported
E3L010131
BDB010131
BDBM221478
C[C@@H](CO)Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C23H27F3N6O3
492.502000
KTDIYIBRNXDKCP-QWHCGFSZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221478; PubChem:CID90318478
Local ready
Direct docking supported
E3L010132
BDB010132
BDBM221479
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C25H29F3N6O2
502.541000
REZUKVHJMDOXBW-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221479; PubChem:CID90325069
Local ready
Direct docking supported
E3L010133
BDB010133
BDBM221480
C[C@@H](Nc1nc(C(=O)O)nc2nc(NC3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H31F3N6O2
516.568000
KDEHZFCQSLNCCK-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221480; PubChem:CID90325212
Local ready
Direct docking supported
E3L010134
BDB010134
BDBM221481
C[C@@H](Nc1nc(C(=O)O)nc2nc(NCc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H27F3N6O2
524.547000
CIYJGEILZJNTKF-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221481; PubChem:CID90325233
Local ready
Direct docking supported
E3L010135
BDB010135
BDBM221482
C[C@@H](Nc1nc(C(=O)O)nc2nc(N(C)Cc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H29F3N6O2
538.574000
IMUSZOWIYDUGPM-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221482; PubChem:CID90318169
Local ready
Direct docking supported
E3L010136
BDB010136
BDBM221483
C[C@@H](Nc1nc(C(=O)O)nc2nc(N(C)C3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H33F3N6O2
530.595000
LNCCMJYKYARTAY-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221483; PubChem:CID90325219
Local ready
Direct docking supported
E3L010137
BDB010137
BDBM221484
C[C@H](Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)c1ccccc1
C28H29F3N6O2
538.574000
UBJYYTZEBYXWAU-SJORKVTESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221484; PubChem:CID90325208
Local ready
Direct docking supported
E3L010138
BDB010138
BDBM221485
C[C@@H](Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)c1ccccc1
C28H29F3N6O2
538.574000
UBJYYTZEBYXWAU-IAGOWNOFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221485; PubChem:CID90318181
Local ready
Direct docking supported
E3L010139
BDB010139
BDBM221486
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCOC(C)(C)C3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H31F3N6O3
532.567000
PLQFHBWINTVIQD-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221486; PubChem:CID90325213
Local ready
Direct docking supported
E3L010140
BDB010140
BDBM221487
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CC(C)(C)OC(C)(C)C3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H35F3N6O3
560.621000
PWVMAEFKTHKXTQ-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221487; PubChem:CID90324994
Local ready
Direct docking supported