E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010241
BDB010241
BDBM221965
C[C@@H](Nc1nc(C(=O)O)nc2nc(COCc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H28F3N5O3
539.558000
WBECRWSWISZHNI-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221965; PubChem:CID90325505
Local ready
Direct docking supported
E3L010242
BDB010242
BDBM221966
CC(C)CC(=O)N(C)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C26H31F3N6O3
532.567000
SLUNUCQUBDJTEK-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221966; PubChem:CID90320083
Local ready
Direct docking supported
E3L010243
BDB010243
BDBM221968
C[C@@H](Nc1nc(C(=O)O)nc2nc(N(C)C(=O)C3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H33F3N6O3
558.605000
NCCKFRAMKWGWHR-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221968; PubChem:CID90320039
Local ready
Direct docking supported
E3L010244
BDB010244
BDBM221971
CC(C)COC(C)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C26H32F3N5O3
519.568000
CGUQCGMKYDLIMB-AAFJCEBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221971; PubChem:CID90319432
Local ready
Direct docking supported
E3L010245
BDB010245
BDBM221972
CC(OCc1ccccc1)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C29H30F3N5O3
553.585000
SAPFUJFGGBEILQ-QNSVNVJESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221972; PubChem:CID90317742
Local ready
Direct docking supported
E3L010246
BDB010246
BDBM221973
CC(O)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C22H24F3N5O3
463.460000
UGKHNXREGYLOCM-JHJMLUEUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221973; PubChem:CID90318015
Local ready
Direct docking supported
E3L010247
BDB010247
BDBM221975
CC(Oc1ccccc1)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C28H28F3N5O3
539.558000
CGQLGNZYOZCOAG-TZHYSIJRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221975; PubChem:CID90318290
Local ready
Direct docking supported
E3L010248
BDB010248
BDBM221976
CC(C)CN(C)C(C)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C27H35F3N6O2
532.611000
ZDATYUFGNHUFBY-TZHYSIJRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221976; PubChem:CID90317579
Local ready
Direct docking supported
E3L010249
BDB010249
BDBM221977
CC(c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)N(C)c1ccccc1
C29H31F3N6O2
552.601000
HCEYVZXHOKMBKM-QNSVNVJESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221977; PubChem:CID90318086
Local ready
Direct docking supported
E3L010250
BDB010250
BDBM222372
CC(c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)N(C)C1CCCCC1
C29H37F3N6O2
558.649000
CBZYGMNGQJBIED-QNSVNVJESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222372; PubChem:CID90318662
Local ready
Direct docking supported
E3L010251
BDB010251
BDBM222377
CC(c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)N(C)Cc1ccccc1
C30H33F3N6O2
566.628000
FWRRGJPOYFFEOU-MRTLOADZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222377; PubChem:CID90317939
Local ready
Direct docking supported
E3L010252
BDB010252
BDBM222382
C[C@@H](Nc1nc(C(=O)O)nc2nc(CN(C)Cc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H31F3N6O2
552.601000
DHWHZGNQINTVRQ-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222382; PubChem:CID90317622
Local ready
Direct docking supported
E3L010253
BDB010253
BDBM222395
C[C@@H](Nc1nc(C(=O)O)nc2nc(CN(C)C3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H35F3N6O2
544.622000
HEBXCWLQEPJYSG-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222395; PubChem:CID90317826
Local ready
Direct docking supported
E3L010254
BDB010254
BDBM222674
CCCCc1nc(C(C)C)n(-c2ncc(OCC)cn2)c(=O)c1Cc1ccc(-c2ccccc2-c2nnn[nH]2)nc1
C30H33N9O2
551.655000
RYHZXBYVUVJCGO-UHFFFAOYSA-N P37231 Regulatory protein GAL4
BindingDB, PubChem
BindingDB:BDBM222674; PubChem:CID51348175
Local ready
Direct docking supported
E3L010255
BDB010255
BDBM222675
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)N[C@@H](CO)c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H29F3N6O4
582.583000
QBJOSXCXEQZZSB-IERDGZPVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222675; PubChem:CID90317958
Local ready
Direct docking supported
E3L010256
BDB010256
BDBM222676
CC(C)CNC(=O)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C25H29F3N6O3
518.540000
VCPNDJCZLIZHQK-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222676; PubChem:CID90325026
Local ready
Direct docking supported
E3L010257
BDB010257
BDBM222677
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)NCC3CC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C25H27F3N6O3
516.524000
AJWGEIMYQICPIB-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222677; PubChem:CID90325040
Local ready
Direct docking supported
E3L010258
BDB010258
BDBM222678
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)NCc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H27F3N6O3
552.557000
NNCHASOLRRWZCH-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222678; PubChem:CID90318556
Local ready
Direct docking supported
E3L010259
BDB010259
BDBM222679
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)NC3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H31F3N6O3
544.578000
ZHKHLQKJUMCOTO-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222679; PubChem:CID90325112
Local ready
Direct docking supported
E3L010260
BDB010260
BDBM222680
C[C@@H](Nc1nc(C(=O)O)nc2nc(C(=O)Nc3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H25F3N6O3
538.530000
PPONAYSMJBFTII-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM222680; PubChem:CID90325113
Local ready
Direct docking supported