E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010181
BDB010181
BDBM221720
CC(C)CC1COCCN1c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C28H35F3N6O3
560.621000
YTHWEHBSYOOBJK-OQHSHRKDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221720; PubChem:CID90325080
Local ready
Direct docking supported
E3L010182
BDB010182
BDBM221721
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCCCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C32H33F3N8O2
618.664000
BKUIYOXCLFAKHW-PHSANKKPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221721; PubChem:CID136632597
Local ready
Direct docking supported
E3L010183
BDB010183
BDBM221722
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3Cc3cccc(C(F)(F)F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C33H34F6N6O2
660.663000
NUTZLOBJSZPDNO-OEPVSBQMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221722; PubChem:CID90318394
Local ready
Direct docking supported
E3L010184
BDB010184
BDBM221723
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3Cc3ccc(F)cc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C32H34F4N6O2
610.656000
DABCXWWKGLAICJ-OEPVSBQMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221723; PubChem:CID90318686
Local ready
Direct docking supported
E3L010185
BDB010185
BDBM221724
COc1ccc(C2CCCCN2c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)cc1
C32H35F3N6O3
608.665000
ZCEIYEGFLKGBGF-OEPVSBQMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221724; PubChem:CID90325473
Local ready
Direct docking supported
E3L010186
BDB010186
BDBM221726
CCC(c1ccccc1)N(C)c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)c(F)c1
C31H32F4N8O2
624.643000
ZPGZTBRRECNURD-LIXIDFRTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221726; PubChem:CID136632430
Local ready
Direct docking supported
E3L010187
BDB010187
BDBM221731
CC(c1ccccn1)N(C)c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)c(F)c1
C29H29F4N9O2
611.604000
WHWNCRQPPZYWFA-AAFJCEBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221731; PubChem:CID136632449
Local ready
Direct docking supported
E3L010188
BDB010188
BDBM221732
CC(c1cccc(F)c1)N(C)c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)c(F)c1
C30H29F5N8O2
628.606000
PHQQBORPFUZZQD-AAFJCEBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221732; PubChem:CID136632695
Local ready
Direct docking supported
E3L010189
BDB010189
BDBM221733
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC34CCc3ccccc34)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C32H33F3N6O2
590.650000
BKTQNXIOZHXKIW-MFUYNUFSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221733; PubChem:CID90325477
Local ready
Direct docking supported
E3L010190
BDB010190
BDBM221734
CC(Nc1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)c1ccccn1
C28H28F3N9O2
579.587000
UYJBVYHOUCUUFQ-AAFJCEBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221734; PubChem:CID136632696
Local ready
Direct docking supported
E3L010191
BDB010191
BDBM221735
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3C4CCC3COC4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H29F3N6O3
530.551000
NZFMFDGGUYPMCB-FTXHTYHOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221735; PubChem:CID90325643
Local ready
Direct docking supported
E3L010192
BDB010192
BDBM221739
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3C4CCCC3CC4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H31F3N6O2
528.579000
ZDGKAEJIXBUPJJ-APMMTJHUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221739; PubChem:CID90325649
Local ready
Direct docking supported
E3L010193
BDB010193
BDBM221742
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3[C@@H]4CC[C@H]3C[C@H](c3ccccc3)C4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C33H35F3N6O2
604.677000
ZOBKTXMTHZHUPD-DHJQOYHCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM221742
Local ready
Direct docking supported
E3L010194
BDB010194
BDBM221746
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3[C@@H]4CC[C@H]3C[C@H](Oc3ccc(Cl)c(F)c3)C4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C33H33ClF4N6O3
673.111000
SPKIUJRFUOHMDQ-RSZNVJGZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM221746
Local ready
Direct docking supported
E3L010195
BDB010195
BDBM221748
CC(C)CN(C)c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C26H31F3N8O2
544.582000
LCGRKADIEBBRDM-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221748; PubChem:CID136954957
Local ready
Direct docking supported
E3L010196
BDB010196
BDBM221749
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N(C)C3CCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H31F3N8O2
556.593000
ZCFUVOVTJMAXMI-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221749; PubChem:CID136632746
Local ready
Direct docking supported
E3L010197
BDB010197
BDBM221750
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCCC3(C)C)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H31F3N8O2
556.593000
KUGBEQCHQJOOFK-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221750; PubChem:CID136632747
Local ready
Direct docking supported
E3L010198
BDB010198
BDBM221751
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N(C)CC(C)(C)C)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H33F3N8O2
558.609000
RHFHKIXGXFDQML-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221751; PubChem:CID136954978
Local ready
Direct docking supported
E3L010199
BDB010199
BDBM221753
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCCCC34CC4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C28H31F3N8O2
568.604000
RQBCRQJFKRHRAJ-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221753; PubChem:CID136954987
Local ready
Direct docking supported
E3L010200
BDB010200
BDBM221754
CC(C)C1CCCN1c1nc2nc(-c3noc(=O)[nH]3)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C28H33F3N8O2
570.620000
RGPHXFYABYWRGJ-QRIPLOBPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221754; PubChem:CID136632748
Local ready
Direct docking supported