E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L001321
BDB001321
BDBM30768
COCCCn1c(N)c(C(=O)NCCC(C)C)c2nc3ccccc3nc21
C20H27N5O2
369.469000
FAZAOASEFRPREN-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM30768; PubChem:CID663108
Local ready
Direct docking supported
E3L001322
BDB001322
BDBM30771
Nc1c(C(=O)NCc2ccc3c(c2)OCO3)c2nc3ccccc3nc2n1CCCN1CCOCC1
C26H28N6O4
488.548000
NRVYOMDZKFIHNC-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM30771; PubChem:CID663945
Local ready
Direct docking supported
E3L001323
BDB001323
BDBM31072
O=S1(=O)C=C(Sc2nnc(-c3ccccc3)o2)c2ccccc21
C16H10N2O3S2
342.401000
RGXPNQXTNFLPRE-UHFFFAOYSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM31072; PubChem:CID890649
Local ready
Direct docking supported
E3L001324
BDB001324
Ast-487
CCN1CCN(Cc2ccc(NC(=O)Nc3ccc(Oc4cc(NC)ncn4)cc3)cc2C(F)(F)F)CC1
C26H30F3N7O2
529.567000
ODPGGGTTYSGTGO-UHFFFAOYSA-N O14965, O95835, P51617, Q13233, Q92630 Interleukin-1 receptor-associated kinase 1, Aurora kinase A, Serine/threonine-protein kinase LATS1, Dual specificity tyrosine-phosphorylation-regulated kinase 2, Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM31085; PubChem:CID11409972
Local ready
Direct docking supported
E3L001325
BDB001325
Raf265
Cn1c(Nc2ccc(C(F)(F)F)cc2)nc2cc(Oc3ccnc(-c4ncc(C(F)(F)F)[nH]4)c3)ccc21
C24H16F6N6O
518.421000
YABJJWZLRMPFSI-UHFFFAOYSA-N O14965, O95835, P51617, Q13233, Q92630 Mitogen-activated protein kinase kinase kinase 1, Serine/threonine-protein kinase LATS1, Interleukin-1 receptor-associated kinase 1, Aurora kinase A, Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM31088; PubChem:CID11656518
Local ready
Direct docking supported
E3L001326
BDB001326
Mln8054
O=C(O)c1ccc(Nc2ncc3c(n2)-c2ccc(Cl)cc2C(c2c(F)cccc2F)=NC3)cc1
C25H15ClF2N4O2
476.870000
HHFBDROWDBDFBR-UHFFFAOYSA-N O14965, O95835, P51617, Q13233, Q92630 Aurora kinase A, Serine/threonine-protein kinase LATS1, Mitogen-activated protein kinase kinase kinase 1, Interleukin-1 receptor-associated kinase 1, Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM31093; PubChem:CID11712649
Local ready
Direct docking supported
E3L001327
BDB001327
BDBM31094
CO[C@H]1[C@@H](N(C)C(=O)c2ccccc2)C[C@@H]2O[C@@]1(C)n1c3ccccc3c3c4c(c5c6ccccc6n2c5c31)C(=O)NC4
C35H30N4O4
570.649000
BMGQWWVMWDBQGC-PZFYLCKJSA-N O14965, O95835 Serine/threonine-protein kinase LATS1, Aurora kinase A
BindingDB
BindingDB:BDBM31094
Local ready
Direct docking supported
E3L001328
BDB001328
Su-14813
Cc1[nH]c(/C=C2\C(=O)Nc3ccc(F)cc32)c(C)c1C(=O)NC[C@H](O)CN1CCOCC1
C23H27FN4O4
442.491000
CTNPALGJUAXMMC-PMFHANACSA-N O14965, O95835, P51617, Q13233, Q92630 Serine/threonine-protein kinase LATS1, Aurora kinase A, Dual specificity tyrosine-phosphorylation-regulated kinase 2, Interleukin-1 receptor-associated kinase 1, Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM31095; PubChem:CID10138259
Local ready
Direct docking supported
E3L001329
BDB001329
(-)-Staurosporine
CN[C@H]1C[C@@H]2O[C@](C)([C@H]1OC)n1c3ccccc3c3c4c(c5c6ccccc6n2c5c31)C(=O)NC4
C28H26N4O3
466.541000
HKSZLNNOFSGOKW-HMWZOHBLSA-N O14965, O95835 Aurora kinase A, Serine/threonine-protein kinase LATS1
BindingDB, PubChem
BindingDB:BDBM31096; PubChem:CID451705
Local ready
Direct docking supported
E3L001330
BDB001330
Spiro-oxindole, 1
CN(C)C(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1
C25H29Cl2N3O2
474.432000
XTJVNDMNVIYGHY-QDMVCWPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31196; PubChem:CID11351960
Local ready
Direct docking supported
E3L001331
BDB001331
Spiro-oxindole, 4
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCOCC2)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)ccc12
C29H36Cl2N4O3
559.538000
GXAPJIXXSLQQBJ-ZTVFFDQVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31198; PubChem:CID11512421
Local ready
Direct docking supported
E3L001332
BDB001332
Spiro-oxindole, 5
CN(C)C(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C25H28Cl2FN3O2
492.422000
LPOGIWGZPDTWLX-NTWACIBNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31199; PubChem:CID11526064
Local ready
Direct docking supported
E3L001333
BDB001333
Spiro-oxindole, 6
CN(C)C(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1ccc(F)c(Cl)c1
C25H28Cl2FN3O2
492.422000
XUULIKWQEKBINA-QDMVCWPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31200; PubChem:CID11663211
Local ready
Direct docking supported
E3L001334
BDB001334
Spiro-oxindole, 7
CN(C)C(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cc(F)cc(Cl)c1
C25H28Cl2FN3O2
492.422000
FHATUCFTBPTWGI-QDMVCWPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31201; PubChem:CID11620161
Local ready
Direct docking supported
E3L001335
BDB001335
BDBM31202
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCOCC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C29H35Cl2FN4O3
577.528000
YTBYOWZWBDYLQF-BGLPIVGWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM31202
Local ready
Direct docking supported
E3L001336
BDB001336
Spiro-oxindole, 9
CC(C)(C)C[C@@H]1N[C@H](C(=O)NCCN2CCOCC2)[C@@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C29H35Cl2FN4O3
577.528000
YTBYOWZWBDYLQF-MHGRFWDASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31203; PubChem:CID11621174
Local ready
Direct docking supported
E3L001337
BDB001337
Spiro-oxindole, 10
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCCCC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C30H37Cl2FN4O2
575.556000
FFQBAPRTDPSSEL-HVHHDALESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31204; PubChem:CID11541499
Local ready
Direct docking supported
E3L001338
BDB001338
7-(Anilino(phenyl)methyl)-2-methyl-8-quinolinol
Cc1ccc2ccc(C(Nc3ccccc3)c3ccccc3)c(O)c2n1
C23H20N2O
340.426000
WEENRMPCSWFMTE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31206; PubChem:CID248986
Local ready
Direct docking supported
E3L001339
BDB001339
2-phenoxybenzoyltryptophan derivative, R1C1
O=C(N[C@@H](Cc1c[nH]c2cc(Br)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C24H19BrN2O4
479.330000
HUDCALMNDNWXIH-NRFANRHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31207; PubChem:CID44176142
Local ready
Direct docking supported
E3L001340
BDB001340
2-phenoxybenzoyltryptophan derivative, R1C2
O=C(N[C@@H](Cc1cn(C(=O)CCC2CCCC2)c2cc(Br)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H31BrN2O5
603.513000
IEPYWKFTLZZZMO-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31208; PubChem:CID44176143
Local ready
Direct docking supported