E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L001341
BDB001341
2-phenoxybenzoyltryptophan derivative, R1C3
O=C(N[C@@H](Cc1cn(C(=O)OCc2ccccc2)c2cc(Br)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H25BrN2O6
613.464000
JICQRQRHNNITKK-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31209; PubChem:CID44176144
Local ready
Direct docking supported
E3L001342
BDB001342
2-phenoxybenzoyltryptophan derivative, R1C4
O=C(N[C@@H](Cc1cn(Cc2ccc(OCc3ccccc3)cc2)c2cc(Br)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C38H31BrN2O5
675.579000
SBDSDIMVYOUEEB-UMSFTDKQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31210; PubChem:CID44176145
Local ready
Direct docking supported
E3L001343
BDB001343
2-phenoxybenzoyltryptophan derivative, R2C1
O=C(N[C@@H](Cc1c[nH]c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C24H19ClN2O4
434.879000
LZLFTWKFCUCQAY-NRFANRHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31211; PubChem:CID44176146
Local ready
Direct docking supported
E3L001344
BDB001344
2-phenoxybenzoyltryptophan derivative, R2C2
O=C(N[C@@H](Cc1cn(C(=O)CCC2CCCC2)c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H31ClN2O5
559.062000
HNCXCBGJHZVXBL-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31212; PubChem:CID44176147
Local ready
Direct docking supported
E3L001345
BDB001345
2-phenoxybenzoyltryptophan derivative, R2C3
O=C(N[C@@H](Cc1cn(C(=O)OCc2ccccc2)c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H25ClN2O6
569.013000
USVVJMSKOUQARY-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31213; PubChem:CID44176148
Local ready
Direct docking supported
E3L001346
BDB001346
2-phenoxybenzoyltryptophan derivative, R2C4
O=C(N[C@@H](Cc1cn(Cc2ccc(OCc3ccccc3)cc2)c2cc(Cl)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C38H31ClN2O5
631.128000
OYOSGWRVZVTWQM-UMSFTDKQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31214; PubChem:CID44176149
Local ready
Direct docking supported
E3L001347
BDB001347
2-phenoxybenzoyltryptophan derivative, R3C1
O=C(N[C@@H](Cc1c[nH]c2cc(F)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C24H19FN2O4
418.424000
XZCDKMHIEHVAFO-NRFANRHFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31215; PubChem:CID44176150
Local ready
Direct docking supported
E3L001348
BDB001348
2-phenoxybenzoyltryptophan derivative, R3C2
O=C(N[C@@H](Cc1cn(C(=O)CCC2CCCC2)c2cc(F)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H31FN2O5
542.607000
JZXQQRRUFQSGQM-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31216; PubChem:CID44176151
Local ready
Direct docking supported
E3L001349
BDB001349
2-phenoxybenzoyltryptophan derivative, R3C3
O=C(N[C@@H](Cc1cn(C(=O)OCc2ccccc2)c2cc(F)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C32H25FN2O6
552.558000
JTDAJTALRFKEKO-MHZLTWQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31217; PubChem:CID44176152
Local ready
Direct docking supported
E3L001350
BDB001350
2-phenoxybenzoyltryptophan derivative, R3C4
O=C(N[C@@H](Cc1cn(Cc2ccc(OCc3ccccc3)cc2)c2cc(F)ccc12)C(=O)O)c1ccccc1Oc1ccccc1
C38H31FN2O5
614.673000
IZVAHDQNVPJZPA-UMSFTDKQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31218; PubChem:CID44176153
Local ready
Direct docking supported
E3L001351
BDB001351
2-phenoxybenzoyltryptophan derivative, R4C1
N#Cc1ccc2[nH]cc(C[C@H](NC(=O)c3ccccc3Oc3ccccc3)C(=O)O)c2c1
C25H19N3O4
425.444000
RNMJHKQPDFCCQA-QFIPXVFZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31219; PubChem:CID44176154
Local ready
Direct docking supported
E3L001352
BDB001352
2-phenoxybenzoyltryptophan derivative, R4C2
N#Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)CCC1CCCC1
C33H31N3O5
549.627000
WVWRTZSRPMGSGO-NDEPHWFRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31220; PubChem:CID44176155
Local ready
Direct docking supported
E3L001353
BDB001353
2-phenoxybenzoyltryptophan derivative, R4C3
N#Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)OCc1ccccc1
C33H25N3O6
559.578000
ARBOSHRAOXVNJA-NDEPHWFRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31221; PubChem:CID44176156
Local ready
Direct docking supported
E3L001354
BDB001354
2-phenoxybenzoyltryptophan derivative, R4C4
N#Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2Cc1ccc(OCc2ccccc2)cc1
C39H31N3O5
621.693000
AOWLHPAIWPBAAQ-DHUJRADRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31222; PubChem:CID44176157
Local ready
Direct docking supported
E3L001355
BDB001355
2-phenoxybenzoyltryptophan derivative, R5C1
Cc1ccc2[nH]cc(C[C@H](NC(=O)c3ccccc3Oc3ccccc3)C(=O)O)c2c1
C25H22N2O4
414.461000
WGSQKPIUJIOGOT-QFIPXVFZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31223; PubChem:CID44176158
Local ready
Direct docking supported
E3L001356
BDB001356
2-phenoxybenzoyltryptophan derivative, R5C2
Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)CCC1CCCC1
C33H34N2O5
538.644000
XLDQLWPXGSTAGS-NDEPHWFRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31224; PubChem:CID44176159
Local ready
Direct docking supported
E3L001357
BDB001357
2-phenoxybenzoyltryptophan derivative, R5C3
Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2C(=O)OCc1ccccc1
C33H28N2O6
548.595000
FHNQOOZTZWBWQO-NDEPHWFRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31225; PubChem:CID44176160
Local ready
Direct docking supported
E3L001358
BDB001358
2-phenoxybenzoyltryptophan derivative, R5C4
Cc1ccc2c(c1)c(C[C@H](NC(=O)c1ccccc1Oc1ccccc1)C(=O)O)cn2Cc1ccc(OCc2ccccc2)cc1
C39H34N2O5
610.710000
YJHXKFJZIRNVRS-DHUJRADRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31226; PubChem:CID44176161
Local ready
Direct docking supported
E3L001359
BDB001359
Isoindolinone scaffold, 13
CC(C)(C)c1ccc(COC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)cc1
C32H31NO2
461.605000
VBLCHDNBGBWZBP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31227; PubChem:CID16090434
Local ready
Direct docking supported
E3L001360
BDB001360
Isoindolinone scaffold, 14
CCCOC1(c2ccccc2)c2ccccc2C(=O)N1C(Cc1ccc(O)cc1)C(=O)OC
C27H27NO5
445.515000
CYRRIZADGIHBIE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31228; PubChem:CID16090384
Local ready
Direct docking supported