E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L001361
BDB001361
Isoindolinone scaffold, 15
O=C1c2ccccc2C(N[C@@H](CO)[C@@H](O)c2ccccc2)(c2ccccc2)N1Cc1ccccc1
C30H28N2O3
464.565000
JAWSNXONTCNKDG-SRBHEWTHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31229; PubChem:CID44176162
Local ready
Direct docking supported
E3L001362
BDB001362
Isoindolinone scaffold, 16
CCCN1C(=O)c2ccccc2C1(NC(=O)c1ccc(C(C)(C)C)cc1)c1ccc(OCOCC[Si](C)(C)C)cc1
C34H44N2O4Si
572.822000
XUFZRGZDQJZYSZ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31230; PubChem:CID16090385
Local ready
Direct docking supported
E3L001363
BDB001363
Isoindolinone scaffold, 17
CCCN1C(=O)c2ccccc2C1(NC(=O)c1ccccc1)c1ccc(C(C)(C)C)cc1
C28H30N2O2
426.560000
MEIUKHKAHGJIIJ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31231; PubChem:CID16090436
Local ready
Direct docking supported
E3L001364
BDB001364
Isoindolinone scaffold, 18
COc1ccc(C(O)CNC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)cc1
C30H28N2O3
464.565000
HKMINAQPDPJDOG-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31232; PubChem:CID44176163
Local ready
Direct docking supported
E3L001365
BDB001365
Isoindolinone scaffold, 19
O=C1c2ccccc2C(OCc2cccc([N+](=O)[O-])c2)(c2ccccc2)N1Cc1ccccc1
C28H22N2O4
450.494000
AQYYZVUSEBYJAC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31233; PubChem:CID16090387
Local ready
Direct docking supported
E3L001366
BDB001366
Isoindolinone scaffold, 20
O=C1CCCN1CCOC1(c2ccccc2)c2ccccc2C(=O)N1Cc1ccccc1
C27H26N2O3
426.516000
CBVUJGURZFOLKP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31234; PubChem:CID16090437
Local ready
Direct docking supported
E3L001367
BDB001367
Isoindolinone scaffold, 21
C=CC(=O)OCCOC1(c2ccccc2)c2ccccc2C(=O)N1Cc1ccccc1
C26H23NO4
413.473000
MZAVRMYKKYOSTP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31235; PubChem:CID16090388
Local ready
Direct docking supported
E3L001368
BDB001368
Isoindolinone scaffold, 22
CCCCc1ncc(COC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)[nH]1
C29H29N3O2
451.570000
GEHKGKWUUHCQHS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31236; PubChem:CID16090438
Local ready
Direct docking supported
E3L001369
BDB001369
Isoindolinone scaffold, 24
O=C1c2ccccc2C(OCc2ccc(O)cc2)(c2ccccc2)N1Cc1ccccc1
C28H23NO3
421.496000
WMRLUQXKAAFQLC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31237; PubChem:CID16090439
Local ready
Direct docking supported
E3L001370
BDB001370
Isoindolinone scaffold, 25
COc1ccc(CCOC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)cc1OC
C31H29NO4
479.576000
MBAQRMFEGFSNMG-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31238; PubChem:CID44176164
Local ready
Direct docking supported
E3L001371
BDB001371
Isoindolinone scaffold, 26
CC(=O)NCCOC1(c2ccccc2)c2ccccc2C(=O)N1Cc1ccccc1
C25H24N2O3
400.478000
NPUYFSOLWVDWPW-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31239; PubChem:CID16090440
Local ready
Direct docking supported
E3L001372
BDB001372
Isoindolinone scaffold, 28
O=C1c2ccccc2C(OCCN2CCNCC2)(c2ccccc2)N1Cc1ccccc1
C27H29N3O2
427.548000
XKJRGWIKSJTTGT-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31240; PubChem:CID16090441
Local ready
Direct docking supported
E3L001373
BDB001373
Isoindolinone scaffold, 30
O=C1c2ccccc2C(OCc2cccc(O)c2)(c2ccccc2)N1Cc1ccccc1
C28H23NO3
421.496000
RYOPJZHGOZAKKS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31241; PubChem:CID16090393
Local ready
Direct docking supported
E3L001374
BDB001374
Isoindolinone scaffold, 31
O=C1c2ccccc2C(OCc2ccc(Cl)c([N+](=O)[O-])c2)(c2ccccc2)N1Cc1ccccc1
C28H21ClN2O4
484.939000
SJJJFHYCBPENCS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31242; PubChem:CID16090442
Local ready
Direct docking supported
E3L001375
BDB001375
Isoindolinone scaffold, 32
O=C1c2ccccc2C(OCCOc2ccccc2O)(c2ccccc2)N1Cc1ccccc1
C29H25NO4
451.522000
ZRHMXIYIKZKCKW-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31243; PubChem:CID16090394
Local ready
Direct docking supported
E3L001376
BDB001376
Isoindolinone scaffold, 33
CC(C)(C)c1ccc(COC2(c3ccccc3)c3ccccc3C(=O)N2CCc2cnc[nH]2)cc1
C30H31N3O2
465.597000
BUZRFRDGCQIKFD-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31244; PubChem:CID16090443
Local ready
Direct docking supported
E3L001377
BDB001377
Isoindolinone scaffold, 34
O=Cc1ccc(COC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)o1
C27H21NO4
423.468000
YOERQPRARRQVCJ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31245; PubChem:CID16090395
Local ready
Direct docking supported
E3L001378
BDB001378
Isoindolinone scaffold, 35
O=C(NCCOC1(c2ccccc2)c2ccccc2C(=O)N1Cc1ccccc1)c1ccc(O)cc1O
C30H26N2O5
494.547000
MOFQWYMXFRXPKT-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31246; PubChem:CID16090444
Local ready
Direct docking supported
E3L001379
BDB001379
Isoindolinone scaffold, 36
O=C1c2ccccc2C(OCCNc2ccccc2)(c2ccccc2)N1Cc1ccccc1
C29H26N2O2
434.539000
RCTBIDALXDWYTR-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31247; PubChem:CID16090396
Local ready
Direct docking supported
E3L001380
BDB001380
Isoindolinone scaffold, 37
Cc1cccc(N(CCC#N)CCOC2(c3ccccc3)c3ccccc3C(=O)N2Cc2ccccc2)c1
C33H31N3O2
501.630000
BMFNJPLJJZVMPS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31248; PubChem:CID16090445
Local ready
Direct docking supported